FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806929

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806929
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116699
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC69145.924643741591616No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA60255.162854865937154No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA50244.305092588625438No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC47784.094293867128253No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA38623.3093685464314175No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA35043.0025964232769775No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT29282.509018929039666No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA26402.2622301819210104No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG23372.002587854223258No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA21791.8671968054567734No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT18501.5852749380885867No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA15801.3539104876648471No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13791.1816725079049522No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG13121.124259847984987No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC11520.9871549884746228No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA11430.9794428401271646No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC11130.9537356789689715No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA10620.9100335050000429No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA10250.8783280062382711No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9230.7909236583004138No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA9060.7763562669774376No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT8510.7292264715207499No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG8380.7180867016855328No Hit
CATAGACCATGTAATACCATCGTGAGCAGTCACTCAAATATAGACCTCAA8310.7120883640819544No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT7850.6726707169727247No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT7840.6718138116007849No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT7810.6692430954849656No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC7420.6358237859793143No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG7370.6315392591196154No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7360.6306823537476757No Hit
CATAGATGCGCCAGGGTAAAGTCATACACTGATCTAGCTTCGGAATGTTT6800.5826956529190481No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA6540.560416113248614No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6310.5407072896939991No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGAACAAGGGCATGGTCAA6300.5398503843220593No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA6090.521855371511324No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG6020.5158570339077456No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC5830.49957583184088983No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5730.49100677812149207No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT5690.48757915663373297No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTGTGTACAGCCTACATCCC5640.48329462977403403No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5640.48329462977403403No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCTGGCAAAAGGGTAAGAGTTCT5400.4627289008474794No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5110.4378786450612259No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC5040.4318803074576475No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT4950.42416815911018946No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCATTGGTGAAAAGTAGGGGACAGTT4740.40617314629945417No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT4710.40360243018363484No Hit
CATAGAGTCATTCCAAACTGTGCACTTAGGAGTTCTGGCCCCTGTCTATG4700.40274552481169507No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT4480.38389360662901995No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG4460.3821797958851404No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTCCAACTCTATAGATTAT4350.37275383679380286No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA4260.3650416884463449No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC4260.3650416884463449No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT4250.3641847830744051No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4240.36332787770246533No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4110.35218810786724825No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATATCTCAACTCCCAGCTCC4080.3496173917514289No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4070.3487604863794891No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATTTTGGGGGAAGAGAAACA4050.34704667563560954No Hit
CATAGACCCACTTACACACACAGGTTTACACTGACGACAATGGGCACACT4010.34361905414785043No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA3810.3264809467090549No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAAGCACATTATTATTG3800.32562404133711514No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC3800.32562404133711514No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTACACTGATCTAGCTTCGGAATGT3710.31791189298965716No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG3710.31791189298965716No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG3670.31448427150189806No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3670.31448427150189806No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3650.31277046075801845No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGAACAAGGGCATGGTCAAGTGT3570.3059152177825003No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA3550.30420140703862075No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3540.3033445016666809No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG3340.2862063942278854No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3270.280208056624307No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACACCCGTAATCCCTCCC3200.27420971902072855No Hit
CATAGATTTGGCACTCACATACACGCGAGCAGAATTTTGGGGGAAGAGAA3120.2673544760452103No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3100.26564066530133074No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3060.2622130438135717No Hit
CATAGACCCCCATGCAACCACATCTATGTGTACCCCTTTACCTACCTTCT3010.2579285169538728No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2940.2519301793502943No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA2880.2467887471186557No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2880.2467887471186557No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT2870.24593184174671592No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2690.23050754505179993No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2650.22707992356404083No Hit
CATAGACCATGTAATACCATCGTGAGCAGAACCATGAGGGCAAGTGTATG2630.22536611282016125No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTCCCCTTCATTTTGCTGGAACTC2610.2236523020762817No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2600.22279539670434192No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGAACAAGGGCATGGTCAA2600.22279539670434192No Hit
CATAGATGCACCAGAAGCCACCTACCTGGGCCCATAATACACTTTTCTAT2580.22108158596046237No Hit
CATAGACCCCCATGCAACCACATCTATGAGTGTACAGCCTACATCCCTCA2550.21851086984464307No Hit
CATAGACAGTCCTGCCGTGTACATGTGTTCCAACTCTATAGATTATGCTC2440.20908491075330551No Hit
CATAGATCATGAATGACTCCCACTCTGACACTGACGACAATGGGCACACT2390.2048003838936066No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACCCGTAATCCCTCCCTTTTCTA2330.19965895166196798No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2330.19965895166196798No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTCTTCCCCCTTTACCTACCTTCT2280.19537442480226908No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG2280.19537442480226908No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC2200.18851918182675087No Hit
CATAGATCTGGGAGGTGAAGAGGACAATCTGGGAGGAACAGGGAGATGTT2200.18851918182675087No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2170.18594846571093154No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTCTGAGGTTCTTCAACAC2160.18509156033899177No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT2120.18166393885123266No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCACTTTGTTCCCTGGCTT2050.17566560124765424No Hit
CATAGACAGTCCTGCCGTGTACATGTGATGTCCCCCTTCATTTTGCTGGA2040.17480869587571446No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA2010.1722379797598951No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG1990.17052416901601555No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1970.168810358272136No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC1950.16709654752825645No Hit
CATAGACCATGTAATACCATCGTGAGCAGGATGACTTATGGAATCTGAAG1950.16709654752825645No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1930.1653827367843769No Hit
CATAGAATTGCCTACTTTGGGACCCATCTCGGTAGGATGACTTATGGAAT1900.16281202066855757No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT1870.16024130455273825No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1820.15595677769303934No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT1790.15338606157722004No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1780.15252915620528026No Hit
CATAGACAGTATGGGGGAAACGGCTCGTCAGTGTACAAACCAAACAATAG1770.15167225083334046No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC1760.15081534546140068No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1680.14396010248588248No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC1610.13796176488230405No Hit
CATAGACAGAACACCACACCCCTGTCACCACAGCCCAGTTTTCCTTCTCT1600.13710485951036427No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA1600.13710485951036427No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1580.13539104876648472No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1490.12767890041902671No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1480.12682199504708694No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1460.1251081843032074No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG1440.12339437355932785No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGAAAAGTAGGGGACAGTTCT1410.12082365744350851No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC1390.11910984669962896No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTGGTGAAAAGTA1340.11482531983993008No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTCTTAGGA1290.11054079298023119No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGAGGGCAAGTGTATGGTCAG1290.11054079298023119No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1270.10882698223635165No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC1260.10797007686441187No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG1240.10625626612053231No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCTGACGACATGGTTCTACACAT1230.10539936074859253No Hit
CATAGAGCATCCTCGTAATAGCAAACATTAGAGAAGGAAAATGTCAGTGG1200.10282864463277319No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAAGGGCAAGTGTATGGTC1180.10111483388889365No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG1170.10025792851695388No Hit
CATAGAATTCCCCAATGTCCTGTGCACATTGTCCTTGCACACCATGGATC1170.10025792851695388No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)