FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806933

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806933
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138237
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4015229.04576922242236No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC51183.7023372903057794No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA32282.3351201197942664No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT30912.2360149598153893No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC29682.147037334432894No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC28822.0848253361979787No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA28432.056612918393773No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA27611.9972945014721095No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG22511.628362884032495No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA21931.5864059549903429No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT18391.3303240087675514No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA18091.3086221489181622No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA15431.1161989915869122No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA14911.078582434514638No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATACGTGAATGTGGATCAGAAC14351.0380722961291116No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA12680.9172652763008456No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA12390.8962868117797695No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT11170.8080325817255871No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG10660.7711394199816257No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTTGCACAGATCATTTAAGC10150.7342462582376643No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT9720.7031402591202066No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8200.5931841692166352No Hit
CATAGATCATGGGACTTCAGCATGGCCTGACGACATGGTTCTACACCTGA7540.5454400775479792No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGGAGACAGCCGCTCA7410.5360359382799106No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC7070.5114404971172697No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACCATGTTTTCATCCTGCTTCT6970.5042065438341399No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG6810.49263221858113243No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT6460.4673133820901784No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA6130.44344133625585047No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG6040.4369307783010337No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA6000.43403719698778187No Hit
CATAGAGCAACAGGGACTCTCATTCACACTGACTGATACAGGAAGGCCTT5770.41739910443658357No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTCAATGGGCAAGCAATGACAG5350.3870165006474388No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT5130.37110180342455346No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG5080.36748482678298866No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC5060.3660380361263627No Hit
CATAGAGCAACAGGGACTCTCATTCAGTGTCAATGGGCAAGCAATGACAG4710.34071919963540875No Hit
CATAGATCATGGGACTTCAGCATGGCGAGGTGTGCTGGCTTGACTTTTCA4570.3305916650390272No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGATCTATCCAGGAATTTTAT4390.31757054912939375No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4170.3016558519065084No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT4060.2936985032950657No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG3640.263315899505921No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGGAGACAGCCGCTCACCTCT3500.25318836490953944No Hit
CCTGATTGGCCATTTGAACTCTATGAGACCAAGTCTCTGCTACCGTAGGA3060.22135897046376873No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCTGTACCATGTTTTCATCC2970.21484841250895204No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC2850.20616766856919638No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTCATAGACCACCTGATTGGC2820.20399748258425748No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2640.190976366674624No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGGAGACAGCCGCTCACCTC2540.18374241339149433No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2520.18229562273486838No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2470.17867864609330353No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGGAGACAGCCGCTCACCTCTAT2330.16855111149692195No Hit
CATAGAACCTCTTTTGGGGCAAAGTTACACTGACTGATACAGGAAGGCCT2310.167104320840296No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT2240.16204055354210523No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA2210.15987036755716633No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG2210.15987036755716633No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTACACAAAGTCACGAAAGT2190.15842357690054037No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT2160.15625339091560148No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2060.14901943763247177No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2060.14901943763247177No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2040.14757264697584585No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG2000.14467906566259395No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA1970.14250887967765505No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTGGAGA1930.13961529836440315No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1930.13961529836440315No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1920.1388919030360902No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1910.13816850770777722No Hit
CATAGATGTCCATCATGTGGAAGCTGTACCATGTTTTCATCCTGCTTCTA1860.13455153106621237No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1830.13238134508127347No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGATGACATGGTTTACACAT1800.13021115909633457No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1790.12948776376802157No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT1750.12659418245476972No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTGGAGACAGCCGCT1730.12514739179814377No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1650.11936022917164002No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACTGATACAGGAAGGCCTT1600.11574325253007516No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG1590.1150198572017622No Hit
CATAGATCATGGGACTTCAGCATGGCCTTTCCCTCACTCTCTCCATCTAT1580.11429646187344922No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGCTTCCTTCT1560.1128496712168233No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA1550.1121262758885103No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1540.11140288056019733No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1470.10633911326200654No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG1460.10561571793369358No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1400.10127534596381578No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1390.10055195063550279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)