FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138237
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3989928.862750204359177No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA51183.7023372903057794No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA42223.054175076137358No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT32322.338013701107518No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT30532.2085259373394965No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA29642.1441437531196423No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA28162.0370812445293227No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA27301.9748692462944073No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG22471.6254693027192428No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT21621.5639806998126407No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG17961.2992180096500936No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC17951.2984946143217806No Hit
CATAGAAGTTCTGATCCACATTCACGTATACTGGGGACTGTGACTCTGTT14461.0460296447405542No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG14041.0156470409514096No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT12620.9129249043309677No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT11150.8065857910689613No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA10570.764628862026809No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTAGCCATGCTGAAGTCCC9960.7205017469997178No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT9680.7002466778069547No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT8130.5881204019184444No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT7880.5700355187106202No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTTGTCTGTGACAGCTTGTATA7580.5483336588612311No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGGCCATG7530.5447166822196662No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTACTGGGGACTGTGACTCTG7000.5063767298190789No Hit
CATAGAAGCAGGATGAAAACATGGTACATCACTTATACGCCTCCCTGTCT6970.5042065438341399No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG6820.4933556139094453No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTATGCAAGACTAGGCAATTT6110.4419945455992246No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGAATGAGAGTCCCTGTTGC5730.4145055231233316No Hit
CATAGACTGTCATTGCTTGCCCATTGACACTGGGGACTGTGACTCTGTTT5340.38629310531912586No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG5100.36893161743961456No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA5070.36676143145467566No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG4860.3515701295601033No Hit
CATAGACTGTCATTGCTTGCCCATTGACACTGAATGAGAGTCCCTGTTGC4680.33854901365046985No Hit
CATAGATGAAAAGTCAAGCCAGCACAGAGACTTGGTCTCATAGATTGCAT4670.33782561832215685No Hit
CATAGATGAAAAGTCAAGCCAGCACACCTCGCCATGCTGAAGTCCCATGA4630.334932037008905No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAACCTTCAGGTCA4310.31178338650288995No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATGCAAGACTAGGCAATT4300.311059991174577No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT4030.2915283173101268No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGCCATGCTGAAGTC3610.2611457135209821No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCAAGACTAGGCAATTTACAAATCT3530.25535855089447834No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGTGTAGA3210.2322099003884633No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA3130.22642273776195954No Hit
CATAGAAGCAGGATGAAAACATGGTACAGGTCTCATAAATTCAACAGGCT2970.21484841250895204No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTCTATGACAACCCCTTAAGAAA2870.2076144592258223No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC2870.2076144592258223No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAACTCAGATGGGATC2770.2003805059426926No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC2700.19531673864450183No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA2560.18518920404812025No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGCCATGCTGAAGTCCCATGATC2550.18446580871980728No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC2430.17578506478005165No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAACTTTGCCCCAAAAGAGG2330.16855111149692195No Hit
CATAGAGGTGAGCGGCTGTCTCCACTGGGGACTGTGACTCTGTTTTCTAT2290.16565753018367008No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC2250.1627639488704182No Hit
CATAGACCCACTTTCGTGACTTTGTGTACGGAGCAGGAATTAGACTCTTG2230.16131715821379225No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2220.16059376288547927No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC2210.15987036755716633No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC2140.15480660025897552No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT2110.15263641427403662No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1980.14323227500596802No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA1970.14250887967765505No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCATGCT1950.1410620890210291No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGTACCACAGGCATGTGCCAC1890.1367217170511513No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1860.13455153106621237No Hit
CATAGAAGCAGGATGAAAACATGGTACAGCTTCCACATGATGGACATCTA1850.1338281357378994No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1800.13021115909633457No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAACAAACAAACAAACAAAAATTAG1780.12876436843970862No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG1770.12804097311139565No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAA1770.12804097311139565No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAATTAGCCAGGCAT1760.12731757778308267No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1750.12659418245476972No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1750.12659418245476972No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCCATGCTGAAGTCCCATG1700.12297720581320486No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1700.12297720581320486No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAAATTAGCCAGGC1670.12080701982826594No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAGGCTGGCAAAGTTCCAA1590.1150198572017622No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1580.11429646187344922No Hit
CATAGATGGAGAGAGTGAGGGAAAGGCCATGCTGAAGTCCCATGATCTAT1570.11357306654513626No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA1560.1128496712168233No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC1520.1099560899035714No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA1520.1099560899035714No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1510.10923269457525843No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG1510.10923269457525843No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTGCTCATTATTAT1500.10850929924694547No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA1470.10633911326200654No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAC1460.10561571793369358No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC1410.10199874129212874No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)