FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166919
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1739210.419424990564286No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG93245.585942882475932No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC90725.434971453219825No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG72484.34222587003277No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG58373.496905684793223No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA56033.3567179290554106No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG55093.3004031895709898No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA52053.1182789257064805No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA51703.0973106716431325No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC43962.63361271035652No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA43412.6006625968284016No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT39792.3837909405160587No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA35832.146550123113606No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC32841.9674213241152896No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT29561.770918828893056No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG27091.622942864503142No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC24651.476764179032944No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG21381.280860776783949No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA19991.1975868535037952No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT19661.1778167853869241No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT16841.0088725669336625No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA14480.8674866252493724No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT13600.814766443604383No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA13430.8045818630593282No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT13270.794996375487512No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC8530.5110263061724549No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT8360.5008417256274001No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGATCATTGTTCACTG8090.4846662153499602No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG7110.4259551039725855No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG6990.41876598829372325No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6940.4157705234275307No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA6850.41037868666838406No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG6560.3930049904444671No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC6560.3930049904444671No Hit
CATAGACGTGACTAAAAGCATGTTGGTGAGGAGCTGAGTCATGGGGTCTA6420.38461768881912783No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT6380.3822213169261737No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGCTATACCACACTACA6190.3708385504346419No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5900.353464854210725No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5430.3253074844685147No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGCTATACCACACTA5370.3217129266290836No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA5340.319915647709368No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA5030.30134376553897396No Hit
CATAGACATTTAATCCTCACAATGACCCATGCTGAAGTGATGGGCTAGAT5010.300145579592497No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGCCCTCTCTGCTGTTCCTTC4980.2983483006727814No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTAACCCCTGCAGTCTTTGGAGGA4750.28456916228829554No Hit
CATAGATCATGGGACTTCAGCATGGCGTTCTACAAAGGATTCTGGGCCAT4750.28456916228829554No Hit
CATAGAAGGACAAAGACATTTAGGACCCAGCCCTGCAGTCTTTGGAGGAA4710.2821727903953415No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT4700.2815736974221029No Hit
CATAGACGTGACTAAAAGCATGTTGGTATGCTGAAGTGATGGGCTAGATC4340.26000635038551634No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACCCACAGCCAGGAAAGAAT4320.2588081644390393No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG4240.25401542065313115No Hit
CATAGATGGCCAAGATACGAGCACATTGCTTCTTGTGGTAACTGGTCTAT4110.24622721200103043No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTATGCAAGGGGTAAGGCGTACT3930.23544353848273716No Hit
CATAGACCAGCAGACACTCCCATCATTCATTAACTGGGTGTGGTGGCATC3880.23244807361654454No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT3730.2234616790179668No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT3720.2228625860447283No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3670.2198671211785357No Hit
CATAGACACAACAGAGAGAACGGGCTGAAATGATGCTGAAGTGATGGGCT3430.2054888898208113No Hit
CATAGACAGTGCCTTTGTGCGTGTTATTGATTCCTGTCATTGTCGCTGTC3310.19829977414194908No Hit
CATAGATGTGTAGCCTGGGTCTGACATGAATGGTGGAAGGGTAAGAGAGG3250.194705216302518No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3220.19290793738280243No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3220.19290793738280243No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC3160.18931337954337135No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA3090.1851197287307017No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCCCAACTGTCTCTGAAAAATTTCT3040.18212426386450914No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACATAGAGATCCCACCATTTGC2790.1671469395335462No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTCTGTTTCCCCACTCAAATACCAT2700.16175510277439956No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2630.15756145196172994No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT2600.1557641730420144No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG2600.1557641730420144No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2450.14677777844343665No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT2430.14557959249695962No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACTGACGCTATACCACACTA2380.14258412763076703No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGTGTATTAACTGGGTGTGG2290.13719229087162035No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2280.13659319789838184No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGACACTGACGATCATTGTTCA2200.1318004541124737No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTTCTACAAAGGATTCTGGGC2180.13060226816599668No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG2080.12461133843361151No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCATGGTTCTACACATAGAGATCCC2050.12281405951389596No Hit
CATAGATGAGGACACCATAAAGACAACAAGGGGTAAGGCGTACTGGTCTA1980.11862040870122634No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATAGAAATGATGCTGAAGTGATG1900.1138276649153182No Hit
CATAGAAGGACAAAGACATTTAGGACCCATGGGAGGTCTATGAGGTGGAA1890.11322857194207968No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1890.11322857194207968No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1810.10843582815617155No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1770.1060394562632175No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1740.10424217734350194No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1700.10184580545054787No Hit
CATAGACACAACAGAGAGAACGGGCTAGATCTATGAGACCAAGTCTCTGC1670.10004852653083232No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)