FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences197945
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5430027.43186238601632No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC66733.3711384475485615No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC62923.1786607390941928No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA38501.9449847179772157No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA34601.7479602920003032No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA33581.696430826744803No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT32591.6464169339968173No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA31311.5817525070095226No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA25421.2841951047008007No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC25121.2690393796256536No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA23511.1877036550556972No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA23111.1674960216221677No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT21931.1078835029932557No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA21781.1003056404556821No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA18320.9255096112556519No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA14550.7350526661446362No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT13440.6789764833665917No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT11220.5668241178105029No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA8360.42233953876076685No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC7210.36424259263936953No Hit
CATAGATGTATACAAGCTGTCACAGACAACATTTTTCTTCATTCAGCAAC7050.3561595392659577No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTGGAGACAGCCGCTCACCTCT6980.35262320341509007No Hit
CATAGAACTTCACAAGGGCTTTAGGGCATAGAGTCAAAATGGTCAAACAG6980.35262320341509007No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG6040.30513526484629566No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC5680.2869483947561191No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5530.2793705322185455No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG5260.2657303796509131No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT5190.26219404380004546No Hit
CATAGACAGAAACCACCCAGACAACCGTAAGCAGAATTACCTCTGGATGG4820.24350198287403066No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA4470.22582030361969233No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT4290.21672686857460408No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA4110.2076334335295158No Hit
CATAGACAGAAACCACCCAGACAACCTACGGTTGCACAGATCATTTAAGC4040.20409709767864812No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA4030.2035919068428099No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA3990.20157114349945693No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA3970.20056076182778043No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCTTCCTTCTGCTGGCTATTC3940.19904518932026571No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA3930.1985399984844275No Hit
CATAGATCATGGGACTTCAGCATGGCCTGGCTCTCCTTCACCTGCTGCAT3800.1919725176185304No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3740.18894137260350097No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA3720.1879309909318245No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT3720.1879309909318245No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGCACAAAGTCACGAAAGTGGGTC3480.1758064108717068No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA3480.1758064108717068No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG3350.1692389300058097No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT3350.1692389300058097No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3170.1601454949607214No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA3140.1586299224532067No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA2980.1505468690797949No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2950.14903129657228018No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA2880.14549496072141252No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2880.14549496072141252No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT2880.14549496072141252No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA2790.14094824319886837No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2760.13943267069135365No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACCCCAAGTGAGGACCAGGGTG2760.13943267069135365No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCGTCTCTA2700.13640152567632424No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA2670.13488595316880952No Hit
CATAGATGTATACAAGCTGTCACAGACAACAGCCATGTCATCTGCCCTTT2660.13438076233297128No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG2600.13134961731794184No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA2600.13134961731794184No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2540.12831847230291243No Hit
CATAGATCATGGGACTTCAGCATGGCTGGAGGCAGGAGAGGCTCAGAGGG2520.12730809063123597No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA2490.12579251812372122No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCTGTCTCTA2470.12478213645204475No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCCCATCTCTA2460.12427694561620653No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2420.12225618227285358No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2350.11871984642198591No Hit
CATAGATCATGGGACTTCAGCATGGCGATGTTTGCAGATTTGGACCTGCG2350.11871984642198591No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG2340.11821465558614766No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCTACCAGAAATA2330.11770946475030944No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA2330.11770946475030944No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCGTCTCTA2310.11669908307863296No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCGTCTCTA2290.11568870140695649No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA2240.11316274722776529No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2220.1121523655560888No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTATCTCTA2210.11164717472025058No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA2210.11164717472025058No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC2180.11013160221273585No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG2120.10710045719770644No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG2110.1065952663618682No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA2070.10457450301851524No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA2060.10406931218267701No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAGCCCCATCTCTA2060.10406931218267701No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA2050.10356412134683876No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG2050.10356412134683876No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG2030.10255373967516229No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA2020.10204854883932406No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTGAGCTTAAATAATCTGTGA1990.10053297633180933No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1980.1000277854959711No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)