FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806951

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806951
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences254999
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3859215.134176996772537No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC119454.684332095419982No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC90283.540406040808003No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC70912.7807952188047795No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA62892.466284181506594No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA52782.0698120384785823No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA48621.906674143820172No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA47341.856477868540661No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA43321.6988301914909472No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA39181.536476613633779No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT36541.4329467958697877No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG35581.3952995894101545No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT30951.2137302499225486No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT29561.1592202322362049No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACTGATACAGGAAGGCCT27841.0917689873293621No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA27401.0745140177020303No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA25190.9878470111647497No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG23700.9294154094721939No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC22650.8882387774069702No Hit
CATAGATGTATACAAGCTGTCACAGACAACAACACTGGAGACAGCCGCTC22180.8698073325777748No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT21350.837258185326217No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA20900.819611057298264No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGATTTGTAAATGACCT18510.7258851995498022No Hit
CATAGAGGATCCCATCTGAGTTGGTCACCTGATTGGCCATTTGAACTCTA18490.7251008827485598No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT16750.6568653210404747No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC16380.642355460217491No Hit
CATAGATGTATACAAGCTGTCACAGACAACACACTGACTGATACAGGAAG15640.6133357385715238No Hit
CATAGATCATGGGACTTCAGCATGGCTATTGGAGACAGCCGCTCACCTCT15530.6090219961646909No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA15500.6078455209628273No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT15140.5937278185404649No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG14710.5768650073137541No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA13860.543531543260954No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC13740.5388256424534998No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAAATGACCTTCTCTTCTG12830.5031392279969725No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT11370.44588410150628044No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT10450.409805528649132No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGTACGGTTGCACAGATCATTTAA10250.4019623606367084No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC9980.39137408381993655No Hit
CATAGATCCTCTCATTGTCCAGTTTGGATCCTTTCCCTCACTCTCTCCAT9850.3862760246118612No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA9200.36078572857148455No Hit
CATAGACAGGGAGGCGTATAAGTGATGCACTGACTGATACAGGAAGGCCT8970.3517660853571975No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC8320.32627578931682083No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA8290.3250993141149573No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTGGCTTGACTTTTCATCTAT8280.3247071557143361No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT8000.3137267204969431No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC7330.28745210765532414No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACAAGCAATGGGGAAAGG7140.28000109804352175No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG7090.27804030604041585No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT7030.2756873556366888No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA6720.2635304452174322No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC6620.25960886121122045No Hit
CATAGACCTTTGGGTTCATATCATCTGGCACTGACTGATACAGGAAGGCC6280.24627547559010035No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT6170.24196173318326739No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA6150.241177416382025No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA5540.21725575394413313No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCTATGAGACTGTACCATGTTT5370.21058906113357306No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC4940.19372624990686238No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG4640.18196149788822702No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTTGGAGACAGCCGCTCA4580.17960854748449995No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT4530.17764775548139405No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA4420.1733340130745611No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA4410.17294185467393988No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA4370.1713732210714552No Hit
CATAGAAAACAGAGTCCCAGTCCCCAGTATCCCCAGAAATGTTAGCATGT4260.16705947866462223No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT4180.1639222114596528No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA4170.1635300530590316No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT4100.16078494425468334No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCATGGTTCTACACAAAGTCA4050.15882415225157745No Hit
CATAGATGTCCATCATGTGGAAGCTGACTGATACAGGAAGGCCTTTCTAT3750.1470594002329421No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA3680.14431429142859384No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG3540.13882407381989734No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG3520.13803975701865498No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT3450.13529464821430673No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG3270.1282357970031255No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGATCCCCAGAA3260.12784363860250433No Hit
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA3240.12705932180126198No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA3230.1266671634006408No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG3200.12549068819877726No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG3190.12509852979815606No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT3170.1243142129969137No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTACAAGCAATGGGGAAAG3150.12352989619567137No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA2900.11372593618014187No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACTGATACAGGAAGGCC2880.11294161937889953No Hit
CATAGACCTTTGGGTTCATATCATCTGGTACGGTAGCAGAATTACCTCTG2850.111765144177036No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA2830.11098082737579364No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA2760.10823571857144537No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA2680.10509845136647594No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA2660.1043141345652336No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2620.10274550096274887No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCATCTCTA2570.10078470895964298No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)