FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806955

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806955
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4106
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA2726.624452021432051No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA2636.405260594252314No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC1453.5314174378957626No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT1172.8494885533365806No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1002.4354603019970775No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT882.143205065757428No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC852.0701412566975157No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC832.0214320506575745No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC801.948368241597662No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT711.7291768144179251No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTCTACACATAGATTCTCCCTTGTG691.6804676083779835No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGACTCTT591.4369215781782758No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT591.4369215781782758No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG511.2420847540185096No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTTACGGTACACTGAGGAAT421.0228933268387725No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA400.974184120798831No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT380.9254749147588894No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT370.9011203117389186No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGAGAGGCTGTT350.8524111056989772No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC340.8280565026790063No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG330.8037018996590355No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGAGGAATTCTTGCCA330.8037018996590355No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT330.8037018996590355No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT310.754992693619094No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGGCAACAGAACAAC300.7306380905991232No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC280.6819288845591817No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT280.6819288845591817No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACTTTTAACGGACACACGCT270.6575742815392108No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG260.6332196785192401No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACACTTCAGTTGACTATA250.6088650754992694No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACCATGTTGAGGAATTCTTG250.6088650754992694No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACTCTTCACTATGT240.5845104724792985No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTGCTCATACAGAATTAG240.5845104724792985No Hit
CATAGACCACACCCAAACACCACGTAACACTGATCTGAGCAAGGATAGCC240.5845104724792985No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC230.5601558694593278No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACGTATGGGCAACAGAA230.5601558694593278No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCATAGCTTGGGTGACAGAG220.535801266439357No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT220.535801266439357No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGGCAACA220.535801266439357No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTTCAGTTGACTATAAGAAA210.5114466634193863No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT210.5114466634193863No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA210.5114466634193863No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT190.4627374573794447No Hit
CATAGACAGCTCACAGACTGCATACTACACTGATCTGAGCAAGGATAGCC190.4627374573794447No Hit
CATAGATCTGTGGCTCCCGATAAATGTACACTGATCTGAGCAAGGATAGC180.438382854359474No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGGCAACAGAAC180.438382854359474No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTAACTTCAGTTGAC180.438382854359474No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG160.3896736483195324No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTACTGGGTGAGAA160.3896736483195324No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTACTGGGTGAGAAA160.3896736483195324No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG160.3896736483195324No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTGGGTG160.3896736483195324No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGAGACAGCCGCTCACCTCTA140.34096444227959083No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGCTTGGGTGACAGAGTG130.31660983925962005No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGTGAGAGGCAGTCTCAAACG130.31660983925962005No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTGACTCTTCACTATGTC130.31660983925962005No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTACTGGGTGAGAAA120.2922552362396493No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACGACTCTTCACTATGTC120.2922552362396493No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT120.2922552362396493No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA120.2922552362396493No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC110.2679006332196785No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA110.2679006332196785No Hit
CATAGAACTATGTCAAGAGAATTTTGCACAGACATGACTCTTCACTATGT110.2679006332196785No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACTCTTCACTATG110.2679006332196785No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA110.2679006332196785No Hit
CATAGACTTGATGCCCAGGAAACCTCTACACTGACGACATGGTGGGTGCC100.24354603019970775No Hit
CATAGACCACACCCAAACACCACGTACACTGTGCTCATACAGAATTAGAT100.24354603019970775No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTTC100.24354603019970775No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATGGTTCTACACATAGAACCCAA100.24354603019970775No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA100.24354603019970775No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC100.24354603019970775No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTTCTAC100.24354603019970775No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGTTCTACACATAGAACCCAAAG100.24354603019970775No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG100.24354603019970775No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGGAGAGGCTGTTTGA100.24354603019970775No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC100.24354603019970775No Hit
CATAGAATGCAGGAGAATATACACAGGTTTGGTCTCATGGTGGGTGCCTG100.24354603019970775No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGACATGGTTCTACACATAGAACCC90.219191427179737No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA90.219191427179737No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGGGGACATGGATGAAG90.219191427179737No Hit
CATAGACAGGAGGAGGAAGAAGAGGACACTGACGACATGGTTCTACACAT90.219191427179737No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG80.1948368241597662No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG80.1948368241597662No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC80.1948368241597662No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTGACGACATGGTTCTACACATAG80.1948368241597662No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA80.1948368241597662No Hit
CATAGACCACACCCAAACACCACGTAGGCCTGAGATTGCTGCTATCTATG80.1948368241597662No Hit
CATAGATCTGTGGCTCCCGATAAATGTGTAGGGGTGGTCTTACTCTTCCC80.1948368241597662No Hit
CATAGATCTGTGGCTCCCGATAAATGTATGGGACTTCAGTTGACTATAAG80.1948368241597662No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGACATGGTTCTACACATAGAACC80.1948368241597662No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC70.17048222113979541No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA70.17048222113979541No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA70.17048222113979541No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC70.17048222113979541No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA70.17048222113979541No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACTGGGCAACAGAACAAC70.17048222113979541No Hit
CATAGAACAAGGCCAGAATTACCCTGACGACATGGTTCTACACATAGAAC70.17048222113979541No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGCTCTACACA70.17048222113979541No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC60.14612761811982464No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACACTGACGACATGGTGGGTGCCT60.14612761811982464No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT60.14612761811982464No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC60.14612761811982464No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC60.14612761811982464No Hit
CATAGATCATGGGACTTCAGCATGGCGGGTGCCTGATTGTTCTATGAGAC60.14612761811982464No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA60.14612761811982464No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC50.12177301509985387No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGACCAACTGAGGAATTCTTG50.12177301509985387No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTATAGAACCCAAAGAGTGAGC50.12177301509985387No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACACTGACGACATGGTTCTACACA50.12177301509985387No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATACGGTAGCAGAGAATTAG50.12177301509985387No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT50.12177301509985387No Hit
CATAGAATGCAGGAGAATATACACAGGTTATAGAATTAGCGGAGAGTGAG50.12177301509985387No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT50.12177301509985387No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTCTGAGATCT50.12177301509985387No Hit
CATAGATTCTCCCTTGTGCTTTTGGTATAGATTCTCCCTTGTGCTTTTGG50.12177301509985387No Hit
CATAGAATGCAGGAGAATATACACAGCTTGGGTGACAGAGTGAGTCTATG50.12177301509985387No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC50.12177301509985387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)