FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4106
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA3298.012664393570384No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT2696.551388212372139No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG2265.504140282513395No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG1824.432537749634681No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA1062.581587920116902No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG992.4111056989771065No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT912.2162688748173407No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT801.948368241597662No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG791.9240136385776911No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT671.6317584023380418No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTAGAAGC511.2420847540185096No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG481.169020944958597No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTACCGTAACTATGGCTTAATG421.0228933268387725No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA400.974184120798831No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT380.9254749147588894No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT350.8524111056989772No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA320.7793472966390648No Hit
CATAGATCTCAAACAGCCTCTCCCAGTGTACTATGGCTTAATGTTTCTCT320.7793472966390648No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA310.754992693619094No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG310.754992693619094No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGAAGCTTTGAGATTTGTGT310.754992693619094No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG310.754992693619094No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTGTAGAAGCTTTGAGATTTGTGT300.7306380905991232No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT290.7062834875791525No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT280.6819288845591817No Hit
CATAGAGCAGCGTGTGTCCGTTAAAAGTAGAAGCTTTGAGATTTGTGTCT260.6332196785192401No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTTACGTGGTGTTTGGGTGTG260.6332196785192401No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAGGCAAGGGT260.6332196785192401No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTCTCATAGAGGTTTCCTG260.6332196785192401No Hit
CATAGATCCCTGGCAAGAATTCCTCAACATGGTTCCCCAATATGAACAGA250.6088650754992694No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAAGCTTTGAGAT240.5845104724792985No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT230.5601558694593278No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT230.5601558694593278No Hit
CATAGATGTTGTTGTTCTGTTGCCCATACGTAGCAGAAGCTTTGAGATTT230.5601558694593278No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTAGCAGAGACTTGGTCTCA220.535801266439357No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACTATGGCTTAATGTTTCT220.535801266439357No Hit
CATAGACTCACTCTGTCACCCAAGCTATGGTGCCATACCAAGAATAAGAA220.535801266439357No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCCATACCAAGAATAAGAA210.5114466634193863No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG200.4870920603994155No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG190.4627374573794447No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACATTTATCGGGAGCCACA180.438382854359474No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA180.438382854359474No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC180.438382854359474No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAACCTGTGTATATT170.41402825133950316No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA160.3896736483195324No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTAGTATGCAGTCTGTGAGCT160.3896736483195324No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG140.34096444227959083No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGAAGCTTTGAGA140.34096444227959083No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGCAGGGTAATTCTG140.34096444227959083No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGAGGCAAGGGTA140.34096444227959083No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT130.31660983925962005No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTACTATGGCTTAATGTTT130.31660983925962005No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGCAGAGGCAAGG130.31660983925962005No Hit
CATAGACACAACGTTTGAGACTGCCTCTCACCAGGAAAGTTGGAACCTAT130.31660983925962005No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC110.2679006332196785No Hit
CATAGAGCCATCATCATTTCTCACCCAGTACGGTAGCAGGAAAGTTGGAA110.2679006332196785No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCTGTGCAAAATTCTC100.24354603019970775No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG100.24354603019970775No Hit
CATAGATCTCAAACAGCCTCTCCCAGTGTAGAGGCAAGGGTACTATTTTG100.24354603019970775No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCACACTATGGCTTAATGTTT100.24354603019970775No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT100.24354603019970775No Hit
CATAGAACAATCAGGCACCCACCATGAGACCAAACCTGTGTATATTCTCC100.24354603019970775No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTACGTGGTGTTTGGG100.24354603019970775No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGTGTAGAGGCAAGGGTACTATT100.24354603019970775No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG90.219191427179737No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC90.219191427179737No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGTTTCCTGGG90.219191427179737No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA90.219191427179737No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTCATAGAGAAGCTTTGAGA80.1948368241597662No Hit
CATAGAGCCAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA80.1948368241597662No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG80.1948368241597662No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT80.1948368241597662No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACATCTATGTGTAGAACCAT80.1948368241597662No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC80.1948368241597662No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT70.17048222113979541No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATACATTTATCGGGAG70.17048222113979541No Hit
CATAGATAGCAGCAATCTCAGGCCTACGTGGTGTTTGGGTGTGGTCTATG70.17048222113979541No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC70.17048222113979541No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCACT70.17048222113979541No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA70.17048222113979541No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA70.17048222113979541No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGTAGAACCATGTCGTC70.17048222113979541No Hit
CATAGACGGGAAGAGTAAGACCACCCCTACACATTTATCGGGAGCCACAG70.17048222113979541No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGTTTCCTGGGCATCAAGTC60.14612761811982464No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG60.14612761811982464No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTAGCAGAGGCAAGGGTACTATTT60.14612761811982464No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC50.12177301509985387No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT50.12177301509985387No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATAGAAGCTTTGAGA50.12177301509985387No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG50.12177301509985387No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA50.12177301509985387No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGTGTAGAACCATGTCGTCAG50.12177301509985387No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATC50.12177301509985387No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA50.12177301509985387No Hit
CATAGACTCACTCTGTCACCCAAGCTGTGTATATTCTCCTGCATTCTATG50.12177301509985387No Hit
CATAGAACAATCAGGCACCCGCCATGCTGAAGTCCCATGATCTATGTGTA50.12177301509985387No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT50.12177301509985387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)