FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85856
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2025223.588333954528512No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA69898.140374580693253No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC41364.817368617219531No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG32383.7714312336936264No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT26673.106364144614238No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA22712.645126723816623No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT16101.8752329481923222No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG15901.8519381289601191No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT14071.6387905329854642No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT12251.4268076779724188No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA8460.9853708535221767No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA8390.9772176667909057No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG7680.8945210585165859No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA6220.7244688781215058No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6000.6988445769660827No Hit
CATAGACCCTGGATTAGCATGAGGAACATGGCTTCCCATTTCAGACAAGG5510.641772269847186No Hit
CATAGACCAGACTTTTGAAAGAAGCACATCACTTATACGCCTCCCTGTCT4690.5462635109951547No Hit
CATAGACCCTTACCAATAACACAATCAACACTGGGGACTGTGACTCTGTT4550.5299571375326128No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC4400.5124860231084607No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA4210.49035594483786804No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT3850.4484252702199031No Hit
CATAGACCCTTACCAATAACACAATCAACACACACTGAACATAGCCTTTG3560.4146477823332091No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT3500.40765933656354825No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG3270.3808702944465151No Hit
CATAGACCCACTTTCGTGACTTTGTGACCAAGTCCCCTAAAGCCCTTGTG3250.3785408125232948No Hit
CATAGATTTGGGGACCTGGGTCAATACACTGGGGACTGTGACTCTGTTTT3150.36689340290719347No Hit
CATAGAGTTCAAATGGCCAATCAGGTAACTTCACTGGGGACTGTGACTCT3130.36456392098397317No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC2960.3447633246366008No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG2840.3307864330972792No Hit
CATAGAGTTCAAATGGCCAATCAGGTCGTCAGTGTGGAAGTACACAAAAA2830.32962169213566905No Hit
CATAGACTTCCTTGCCCCCATTTATTTGTCTATGTGTAGAACCATGTCGT2690.3133153186731271No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTAGCCATGCTGAAGTCCC2630.3063268729034663No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATGCCATGCTGAAGTCCCATGATC2620.30516213194185615No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTACTTGGAAGTTA2380.27720834886321283No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCCATGCTGAAGTCCCATG2370.2760436079016027No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG2120.24692508386134926No Hit
CATAGATGAAAAGTCAAGCCAGCACACACTGAACATAGCCTTTGGGGTTT2110.2457603428997391No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTGAATGAGAGTCCCTGTTGCTCTA2090.2434308609765188No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGGAAGTACACAAAAAGGGCATC2080.2422661200149087No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2050.2387718971300783No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTCTATGTGTATTGGAAGTTAGG2030.236442415206858No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATCACTTATACGCCTCCC2020.23527767424524784No Hit
CATAGAAGTTCTGATCCACATTCACGTATCACATAGATTGGAAGTTAGGA1940.22595974655236678No Hit
CATAGAATTCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA1940.22595974655236678No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAC1930.22479500559075663No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGAACATAGCCTTTGGGGTTTCT1930.22479500559075663No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1880.2189713007827059No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGAACCATGTCGTCAGTGTTGG1860.21664181885948566No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT1830.21314759597465524No Hit
CATAGACATGCTAACATTTCTGGGGATAAGGCTGGCAAAGTTCCAATCTA1780.20732389116660455No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA1730.20150018635855388No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTAAGGCCATGCTGAAGTCCCA1730.20150018635855388No Hit
CATAGAAGCAGGATGAAAACATGGTACAGTGTATGGAAGTACACAAAAAG1700.19800596347372343No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATCACTTATACGCCTCCCTGTCTA1680.19567648155050318No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1640.1910175177040626No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1610.18752329481923222No Hit
CATAGATTTGGGGACCTGGGTCAATACATGGAAGTACACAAAAAGGGCAT1600.18635855385762207No Hit
CATAGACTTCCTTGCCCCCATTTATTACACTGACGCCATGCTGAAGTCCC1600.18635855385762207No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAAAGCCTTCAGGTCA1580.18402907193440177No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA1570.18286433097279164No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTATAAGGCTGGCAAAGTT1550.18053484904957137No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1510.17587588520313083No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGGGGACTGTGACTCTGTTTTCT1490.17354640327991053No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1480.1723816623183004No Hit
CATAGACCCTTACCAATAACACAATCAACACATGCCATGCTGAAGTCCCA1460.17005218039508013No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG1450.16888743943347No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTATGCAAGACTAGGCAATTT1450.16888743943347No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG1440.16772269847185986No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1430.1665579575102497No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1410.16422847558702944No Hit
CATAGATGGAGAGAGTGAGGGAAAGGACACTGACGCCATGCTGAAGTCCC1310.15258106597092808No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTAAGCTCAATCTATGAGACGC1310.15258106597092808No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATAAATTCAACAGGCTTT1260.14675736116287738No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1260.14675736116287738No Hit
CATAGAATAGCCAGCAGAAGGAAGCATCACTTATACGCCTCCCTGTCTAT1220.14209839731643684No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCAC1180.13743943346999626No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC1170.1362746925083861No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTGGAAGTTAGGAAGCCAGCTCT1130.1316157286619456No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG1120.13045098770033545No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1080.12579202385389487No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTAGCCATGCTGAAGTCCCA1050.12229780096906448No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCAC1030.1199683190458442No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT1020.11880357808423407No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTGGAAGTTAGGAAGCCAGC1020.11880357808423407No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACTGACGACAGCTTCCACATGATG1000.11647409616101378No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC950.1106503913529631No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA910.10599142750652255No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG900.10482668654491242No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA880.10249720462169214No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTCTAGGTGTGCACCAC870.10133246366008199No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC860.10016772269847186No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)