FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206066
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4114119.964962681859213No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA153997.472848504847961No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC104385.065367406559063No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC77673.7691807479157164No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA73853.583803247503227No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA70843.437733541680821No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG70023.3979404656760455No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC66953.248959071365485No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA65793.192666427261169No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG65403.173740452088166No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT52672.555977211184766No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT48462.3516737355992743No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG37631.8261139634874264No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA26771.2990983471315016No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC26681.2947308143992702No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTCAGACATGTTTCCTAG23401.1355585103801695No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG18610.9031087127425194No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGACTTCAGTTGACTATAAGAA16030.7779061077518853No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC15630.7584948511641901No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG15290.7419952830646492No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT14600.7085108654508749No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCAGAGAGGTCTTGGCAGGC14450.7012316442304892No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT13500.6551299098347132No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCATAGAATTAGCGGAGAGTG13430.6517329399318664No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT12890.625527743538478No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC12590.6109693010977066No Hit
CATAGATCTGTGGCTCCCGATAAATGTCATAGAGAATTAGCGGAGAGTGA12040.5842788232896257No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG11410.5537060941640057No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGAGGCCTGAGATTGCTGCTATCT10950.5313831490881562No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC10370.5032368270359981No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTTTTCTCTTCTTGGCATCT10040.4872225403511496No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT9690.4702376908369163No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA8850.42947405200275635No Hit
CATAGAACAATGTAATAAGCATCGGAGGACATGGATGAAGCTGGATCTAT7950.3857987246804422No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCCTGGGTGAGAAATGATGATGGC7760.376578377801287No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA7730.3751225335572098No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT6350.30815369832966133No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCACACTGACTCTTCACTAT5720.2775809692040414No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCACTTCAGT5540.2688459037395786No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC5460.2649636524220395No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC4840.23487620471111195No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4470.21692079236749393No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTCGACATGGTGGGTGCCTGATTGT4400.21352382246464727No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACCGTATGAGGAATTCTTGC4290.20818572690303105No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC4290.20818572690303105No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA4050.19653897295041395No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA4050.19653897295041395No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG3950.19168615880349016No Hit
CATAGACTTGATGCCCAGGAAACCTCTACTTCAGTTGACTATAAGAAACA3820.1853775004124892No Hit
CATAGAGAAGAGAAGGCGACAATGGCAGAAAGAAGCCCCAAGGGCAGGTC3720.18052468626556542No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGGGACATGGATGAAGCTGG3510.17033377655702542No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT3440.16693680665417876No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT3190.15480477128686926No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA3190.15480477128686926No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG3090.14995195713994547No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2980.14461386157832926No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT2970.1441285801636369No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2910.1412168916754826No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTTGGGTGACAGAGTGAGTCTATG2900.14073161026079023No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2770.1344229518697893No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT2760.1339376704550969No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG2510.1218056350877874No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC2350.11404113245270932No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG2340.11355585103801694No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT2230.10821775547640076No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2120.1028796599147846No Hit
CATAGAGGGTGTTCTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA2120.1028796599147846No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)