FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206066
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4084419.820834101695574No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT157477.641726437160909No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG114195.541428474372288No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA78373.8031504469441826No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT76103.6929915658090127No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG71073.4488950142187456No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA70823.4367629788514362No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG70523.4222045364106646No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG66933.2479885085361No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT66793.2411945687304065No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT52992.5715062164549223No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT49732.413304475265206No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG38301.858627818271816No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT27441.331612201915891No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC26931.3068628497665795No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTAGAGGCAAGGGTACTA23621.1462347015034018No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC18160.8812710490813622No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC17000.8249784049770461No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCATAGAGGTTTCCTGGGCA16200.7861558918016558No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA15290.7419952830646492No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT14850.7206429008181845No Hit
CATAGACAAGCCTGCCAAGACCTCTCTGCAGAAGCTTTGAGATTTGTGTC14620.7094814282802597No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT13690.6643502567138684No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATGAGAAGCTTTGAGATTTGTG13610.6604680053963293No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA12740.6182485223180922No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGACATTTATCGGGAGCCA12010.5828229790455485No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG11410.5537060941640057No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGGTAAACAAACTTCTGGCCCTCT11000.5338095561616181No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC10570.5129424553298458No Hit
CATAGATGCCAAGAAGAGAAAAGCAGGAAAGTTGGAACCTATCAGTGTCT10110.4906195102539963No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT9720.47169353508099343No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG9700.4707229722516087No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTACACTGAAACATTTTCTGGTCA9040.4386943988819116No Hit
CATAGATCCAGCTTCATCCATGTCCTCCGATGCTTATTACATTGTTCTAT7990.3877398503392117No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAGCCATTGTCGCCTTCTCTTC7800.3785195034600565No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA7770.37706365921597934No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC6370.3091242611590461No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTGGTGCCATACCAAG5870.2848601904244271No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5670.27515456213057954No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGACTTGGTCTCATAGAGGC5570.2703017479836557No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4810.23342036046703485No Hit
CATAGAACAATCAGGCACCCACCATGTCGAGGTAAACAAACTTCTGGCCC4450.21595022953810913No Hit
CATAGATCCCTGGCAAGAATTCCTCATACGGTAGAAGCTTTGAGATTTGT4310.20915628973241585No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG4300.20867100831772345No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA4090.19848009860918345No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTAGAGGTTTCCTGGGCATCA3930.19071559597410537No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG3550.17227490221579495No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGCCATTGTCGCCTTCTCTT3530.17130433938641018No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG3470.16839265089825592No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT3360.1630545553366397No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG3150.15286364562809973No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT3140.15237836421340734No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3080.14946667572525307No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA2970.1441285801636369No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG2950.14315801733425212No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT2780.13490823328448168No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT2720.1319965447963274No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC2690.13054070055225026No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2360.11452641386740171No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG2300.11161472537924742No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT2290.11112944396455506No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)