FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87599
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1183813.513852897864131No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA46295.284306898480576No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG44775.110788935946757No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA32883.7534675053368187No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT30703.504606216965947No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG29723.392732793753353No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA27373.1244648911517254No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA16571.8915741047272228No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA16101.8379205242068972No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15431.7614356328268588No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC14681.675818217102935No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11951.3641708238678523No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11591.323074464320369No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT11331.293393760202742No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA10501.198643820134933No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8831.0080023744563293No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7850.8961289512437357No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATTTACTGACATGGGCAATT7760.8858548613568649No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7690.8778639025559652No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA7570.8641651160401375No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT7500.856174157239238No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTAGGGTGGGGAAAGAGAG6860.7831139624881562No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG6650.7591410860854576No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6430.7340266441397734No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT6400.7306019475108163No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT6180.705487505565132No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAAACTTAGCAACCTGTACATTTC6070.6929302845922899No Hit
CATAGATGCTTCTGATATGTTGCCGTAATTGGGGATGGCTGGTTGAATCT5620.6415598351579356No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGTTGCCTTTCCTCAGTTCTTTT5610.64041826961495No Hit
CATAGATGTGCCACATACCTTTCCCAACACTGACGACAGTGAAACAAGAT5580.636993572985993No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5440.6210116553841939No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5250.5993219100674665No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAACAGCTAAAAATCTTGGAGC5010.5719243370358109No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA4350.49658101119875797No Hit
CATAGAATACAACACACTCTCTGCCCTGGATCTCCCTCATTATCCCTGTG4170.4760328314250163No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4140.47260813479605934No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGGTGCAAATTGTCAGTGT3760.4292286441626046No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3550.40525576775990596No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG3460.3949816778730351No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC3450.3938401123300494No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT3430.3915569812440781No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3130.3573100149545086No Hit
CATAGACGGGCCAGAGAATAGTGCTAGATGGTTCTGCACATCTACAAGGA3100.35388531832555165No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT3040.34703592506763775No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2980.34018653180972386No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT2930.33447870409479563No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACTGACGACATGTGTGAGAGGGA2790.3184967864929965No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTAATGGAGGAGTATGGGATCT2760.3150720898640395No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2760.3150720898640395No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACAGCTAAAAATCTTGGAGCTCT2730.3116473932350826No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2720.31050582769209695No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGGGCTGGTGGAGGGCTTTGCTGT2690.30708113106314No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG2690.30708113106314No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2630.3002317378052261No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2570.29338234454731216No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT2500.2853913857464126No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA2480.2831082546604413No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGGTAATGGAGGAGTATGGGA2450.27968355803148437No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT2410.2751172958595418No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCCCTCATTATCCCTGTGCCTC2410.2751172958595418No Hit
CATAGAATACAACACACTCTCTGCCCTGATCTCCCTCATTATCCCTGTGC2400.27397573031655614No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT2360.26940946814461353No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG2340.26712633705864225No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2330.2659847715156566No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG2260.257993812714757No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2250.25685224717177135No Hit
CATAGAACATCTACAGAACTCTCTACCCACACGGACTACAAGTACCCACC2210.25228598499982874No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTGGAGGGCTTTGCTGTTTCTA2150.24543659174191484No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA2120.2420118951129579No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC2110.24087032956997223No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA2040.23287937076907272No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2030.23173780522608706No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGTGTAGAACGTTG1960.2237468464251875No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1920.2191805842532449No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAACATTAGCTTAGTTAAT1910.21803901871025924No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1870.21347275653831663No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1870.21347275653831663No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1730.19749083893651756No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1720.1963492733935319No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1700.19406614230756059No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA1670.19064144567860364No Hit
CATAGATGCTTCTGATATGTTGCCGTACATAGATGCTCAGATCTCAAAAG1650.18835831459263233No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT1640.1872167490496467No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCACAACTGGCATCTGGTGATC1630.18607518350666102No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1630.18607518350666102No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTTCTGATATGTTGCCTTT1610.18379205242068974No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1570.17922579024874713No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACATCTACAAGGACACTCATC1540.17580109361979018No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT1510.17237639699083324No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1480.1689517003618763No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1480.1689517003618763No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA1360.15525291384604847No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTGCACA1310.14954508613112022No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1300.14840352058813458No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC1290.1472619550451489No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTACGGTAGCACAACTGGCATC1280.14612038950216327No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1220.13927099624424935No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACAGTGAAACAAGATCGTGC1160.13242160298633546No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1110.1267137752714072No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA1100.12557220972842156No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1090.1244306441854359No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAACTTAGCAACCTGTACATTT1030.11758125092752202No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1030.11758125092752202No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1030.11758125092752202No Hit
CATAGATGGAAATTTTTGGCCAGGCGCTGTGGCTCACACCTATAATCCCA1020.11643968538453636No Hit
CATAGATCACCCAGCCCATATTGCAGCAACAAAAGTCACTCCTCTATGAG1010.11529811984155071No Hit
CATAGAATACAACACACTCTCTGCCCTGTGATATGTCTGCTGAGATTGGC960.10959029212662245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)