FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806968

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806968
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74236
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3369645.39037663667224No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG42295.696697020313595No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA23993.2315857535427552No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG17082.3007705156527827No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT11841.5949135190473627No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT10831.4588609300070048No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG7441.0022091707527345No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG7220.9725739533380031No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG6300.8486448623309446No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA6110.8230508109273129No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC6100.8217037555902796No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTCGCTGACTTCTCTTAAA5770.7772509294681825No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA5620.7570450994126838No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5280.7112452179535534No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGATGGGTTTTTGCCA4230.5698044075650628No Hit
CATAGAGTTTTGTTCCCTTGCTGGCATACGGTAGCAGAGGCACTTGGTCC3700.4984104747023007No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTGACACTCTTGGTCTTTG3460.4660811466135029No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC3270.4404870952098712No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGTCTTTT3120.42028126515437253No Hit
CATAGAAGCAGCATTGATCATCCTCCATACGGTAGCATTTTAACACAGCA2760.3717872730211757No Hit
CATAGACCATCCTCCCACCTTGACCTCAGTGTAAAGTGGGGAAAGGACAC2540.3421520556064443No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT2450.33002855757314514No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT2420.32598739156204537No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2250.30308745083248023No Hit
CATAGACCATCCTCCCACCTTGACCTCCTCTTCTTCTTCTGCTTCCCTGC2230.3003933401584137No Hit
CATAGACCATCCTCCCACCTTGACCTCGCTGACTTCTCTTAAACAGTTCT2210.2976992294843472No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2120.28557573145104803No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT2050.27614634409181527No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCCTCCCATCTCAAGTCTCAC2020.27210517808071555No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA1970.26536990139554933No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTGCCATGCTGA1840.24785818201411713No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1800.24246996066598414No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1670.224958241284552No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC1610.21687590926235248No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG1590.214181798588286No Hit
CATAGACATGAGTGGCCGAACAGACCGTATCCCATCTCAAGTCTCACTCT1530.20609946656608655No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1530.20609946656608655No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1530.20609946656608655No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1480.19936418988092033No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCCGCCAAGCCCGCCAAGCCA1480.19936418988092033No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1370.1845465811735546No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA1360.18319952583652135No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1340.18050541516245489No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1280.1724230831402554No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1280.1724230831402554No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1270.17107602780322215No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1250.16838191712915568No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC1240.16703486179212243No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1230.16568780645508918No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1200.16164664044398944No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1150.15491136375882322No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1130.15221725308475673No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1090.14682903173662373No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1090.14682903173662373No Hit
CATAGCGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1040.14009375505145752No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1010.13605258904035777No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1000.13470553370332453No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT970.1306643676922248No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG950.1279702570181583No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA940.12662320168112506No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA890.11988792499595884No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGGGAAGCAAACACGTC860.1158467589848591No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAGTACCTGGAACCACAGGTG860.1158467589848591No Hit
CATAGAGGGACGGAGGCAAGAGGATAGAGGCACTTGGTCCAGACTTTCTA850.11449970364782586No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAATTGCGGGGCTGATAGGTG850.11449970364782586No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG840.11315264831079262No Hit
CATAGACATGAGTGGCCGAACAGACCACCCAGTACAGGAGCACCCTCTAT840.11315264831079262No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA830.11180559297375935No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA810.10911148229969286No Hit
CATAGAGATGTCAAGAGCAATGCCCACAGCCTTTCCCCATCTCCAACCCT800.10776442696265962No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC800.10776442696265962No Hit
CATAGACCATCTGCGCATCCTGTCTGAGAAGTGAGGAGCCCCTCCGCCCG800.10776442696265962No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTGTCCTTTCCCCATCTCC790.10641737162562638No Hit
CATAGACTACCACTACCCAGCACAGCACAGCTTCTCTACAAAAGCATGGC770.1037232609515599No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA750.1010291502774934No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)