FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8926
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT105211.785794308760924No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA100311.236836208828143No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA8319.30988124579879No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA3974.447680932108447No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTACAAGCAATGGGGAAAGG3523.9435357382926286No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT3383.786690566883262No Hit
CATAGAACCTCTTTTGGGGCAAAGTTGCACAGATCATTTAAGCTCAATCT2452.744790499663903No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2302.576742101725297No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2242.5095227425498545No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC2032.2742549854358054No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC2012.2518485323773247No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1721.9269549630293525No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1691.893345283441631No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1621.8149226977369481No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGGGCA1561.7477033385615057No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT1381.546045261035178No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTTCTTTCAAAAGTCTGGTCT1311.4676226753304953No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG1281.4340129957427739No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCACTGGAGACAGCCGCTCACC1231.377996863096572No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1221.3667936365673312No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTAGTGTTGATTGTGTTATT1041.1651355590410037No Hit
CATAGATCCCATCCAATAATAATGAGCAGCAGCAGAATTACCTCTGGATG1031.1539323325117634No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT1001.120322652924042No Hit
CATAGAGCCAAGGAAAGTTGAATGGACACTGACGACATGGCTACACATGG921.0306968406901187No Hit
CATAGATCCCATCCAATAATAATGAGCAAGTGTGCTTCTTTCAAAAGTCT850.9522742549854357No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA840.9410710284561953No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA830.9298678019269548No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG790.8850548958099933No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG720.8066323101053103No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCCACAAAGTCACGAAAGTG340.3809097019941743No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG330.3697064754649339No Hit
CATAGACCTTTGGGTTCATATCATCTGGGCTACACATGGCTATGCAATCT270.3024871162894914No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC250.2800806632310105No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA200.2240645305848084No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCTGTTATTCAAAG190.212861304055568No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT190.212861304055568No Hit
CATAGAGCCAAGGAAAGTTGAATGGACACTGATCTATCCAGGAATTTTAT180.20165807752632758No Hit
CATAGATGTCCATCATGTGGAAGCTGCACTGACGACATGGTTCTACACAT180.20165807752632758No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACCATGTTTTCATCCTGCTTCT180.20165807752632758No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGATACGTGAATGTGGATC170.19045485099708714No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC160.17925162446784673No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCAAAATGGTCAAACAGGAGGTCT150.16804839793860632No Hit
CATAGACAGGGAGGCGTATAAGTGATGCTACACAAAGTCACGAAAGTGGG150.16804839793860632No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAACGGGCA150.16804839793860632No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACA140.1568451714093659No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA130.14564194488012547No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG110.12323549182164464No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC100.1120322652924042No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA100.1120322652924042No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACTGACGACATGGCTACAC90.10082903876316379No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGATCTATCCAGGAAT90.10082903876316379No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACACCTG90.10082903876316379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)