FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8926
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT100911.304055568003585No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA97210.889536186421688No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA8069.029800582567779No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG3924.391664799462245No Hit
CATAGAATCCTTTCCCCATTGCTTGTACGGAGCAGGAATTAGACTCTTGA3423.8315034730002244No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC3153.5290163567107324No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACTTTGCCCCAAAAGAGGTTCT2372.6551646874299797No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT2172.4311001568451713No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA2112.363880797669729No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG2062.307864665023527No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC2042.2854582119650457No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA1932.1622227201434012No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA1721.9269549630293525No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT1621.8149226977369481No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT1401.5684517140936591No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCCCATTGCTTGCCCATTGCT1361.5236388079766972No Hit
CATAGACCAGACTTTTGAAAGAAGCACATCACTTATACGCCTCCCTGTCT1311.4676226753304953No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGGAGCAGGAATTAGACTCTTGACA1261.4116065426842932No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA1201.3443871835088506No Hit
CATAGACCCTTACCAATAACACAATCAACACTACGGAGCAGGAATTAGAC1061.1875420120994846No Hit
CATAGACCATCCAGAGGTAATTCTGCTGCTGCTCATTATTATTGGATGGG1021.1427291059825229No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAATAGAGCAGGAATTAGACTCT991.1091194263948017No Hit
CATAGATTGCATAGCCATGTGTAGCCATGTCGTCAGTGTCCATTCAACTT931.0419000672193592No Hit
CATAGACCAGACTTTTGAAAGAAGCACACTTGCTCATTATTATTGGATGG850.9522742549854357No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT840.9410710284561953No Hit
CATAGACTGTCATTGCTTGCCCATTGGAAGTTAGGAAGCCAGCTCTATGT820.9186645753977145No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG780.8738516692807529No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG710.79542908357607No Hit
CATAGACTGTCATTGCTTGCCCATTGTAGCAGAGACTTGGTCTCATAGAC380.425722608111136No Hit
CATAGACCCACTTTCGTGACTTTGTGGATTGGAACTTTGCCCCAAAAGAG330.3697064754649339No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG320.35850324893569346No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCCCATTGCTTGCTCATTATT320.35850324893569346No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATCTCATAGAGCAGAAAACCTT300.33609679587721264No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGGAAGT260.29128388976025094No Hit
CATAGATTGCATAGCCATGTGTAGCCCAGATGATATGAACCCAAAGGTCT250.2800806632310105No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT190.212861304055568No Hit
CATAGAAGCAGGATGAAAACATGGTACATCACTTATACGCCTCCCTGTCT180.20165807752632758No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTGTCATTGCTTGCTCATTATT180.20165807752632758No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCAGTGTCCATTCAACTTTC170.19045485099708714No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA160.17925162446784673No Hit
CATAGAAGTTCTGATCCACATTCACGTATCACTGACGCCATGCTGAAGTC160.17925162446784673No Hit
CATAGACCTCCTGTTTGACCATTTTGAGACCAACTCAGATGGGATCCTCT150.16804839793860632No Hit
CATAGACTGTCATTGCTTGCCCATTGTCTCATAGACTGTCATTGCTTGCT150.16804839793860632No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGCATCACTTATACGCCTCCCTG140.1568451714093659No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG140.1568451714093659No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA120.13443871835088506No Hit
CATAGAACGGCCTTCCTGTATCAGTCAGTGTGGAAGTACACAAAAAGGGC110.12323549182164464No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA100.1120322652924042No Hit
CATAGAGTTCAAATGGCCAATCAGGTGTAGCAGAGACTTGGTCTCATAAA100.1120322652924042No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)