FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences154764
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4011625.92075676513918No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA113607.340208317179705No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC77184.986947869013466No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC55093.5596133467731517No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA50043.2333100721097927No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG49683.2100488485694347No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC49643.2074642681760612No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG48153.111188648522912No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA48033.103434907342793No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA41742.6970096404848674No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG32732.1148329068775684No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT25241.6308702282184488No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT18051.1662919025096274No Hit
CATAGACTTGATGCCCAGGAAACCTCACTTCAGTTGACTATAAGAAACAC16571.0706624279548216No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACACTTCAGTTGACTAT15511.0021710475304333No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG15360.9924788710552841No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA14340.9265720710242693No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC14060.9084800082706573No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC12560.8115582435191646No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT11090.7165749140627019No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT10610.6855599493422243No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG8550.5524540590835078No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGACATGGTGGGTGCCTGATTGTT8060.5207929492646869No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC7930.5123930629862242No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA7600.4910702747408958No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC7150.461993745315448No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT6650.4296864903982838No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTCTATACTTCAGTTGACTATAAGA6060.3915639295960301No Hit
CATAGACTTGATGCCCAGGAAACCTCTAGACCCGACTTCAGTTGACTATA6000.3876870590059704No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTATAGAGGCCTGAGATTGCTGCTA5710.3689488511540151No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG5640.3644258354656122No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT4860.31402651779483604No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG4710.30433434131968673No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC4510.29141143935282104No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC4510.29141143935282104No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT4160.2687963609108061No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA3670.23713525109198522No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC3630.2345506706986121No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3490.22550463932180612No Hit
CATAGACAGGAGGAGGAAGAAGAGGATTGCTTGAGCCCCAGGAGTTTGAA3490.22550463932180612No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA3380.21839704324003No Hit
CATAGAACAATGTAATAAGCATCGGAGGACTCTTCACTATGTCATCTTAC3340.21581246284665684No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGTTCTACACATGGTGGGTGCCT3090.19965883538807472No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC3050.1970742549947016No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA2990.1931973844046419No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC2870.1854436432245225No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGGCAGTCT2810.18156677263446278No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTCAGACATGTTTCCTA2530.16347470988085083No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGTTACAACCAATGCTCTTTCATCT2510.16218241968416428No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT2400.15507482360238814No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA2380.15378253340570158No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC2370.1531363883073583No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC2350.15184409811067173No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG2010.1298751647670001No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT1980.1279367294719702No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT1980.1279367294719702No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT1950.1259982941769404No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1910.12341371378356723No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT1850.11953684319350755No Hit
CATAGAACAATGTAATAAGCATCGGAGGACATGGATGAAGCTGGATCTAT1780.11501382750510455No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1720.11113695691504484No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAAGAGAGCCTCTGTCCCTG1700.10984466671835828No Hit
CATAGAACAAGGCCAGAATTACCCTGGGACATGGATGAAGCTGGATCTAT1600.10338321573492544No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1570.10144478043989558No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)