FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70608
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG61458.70297983231362No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG46576.595569907092681No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT38645.472467709041468No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT32454.595796510310446No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT31194.417346476319964No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC27833.94147971901201No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG24763.506684794924088No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG21623.0619759800589166No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT21343.0223204169499205No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA17642.498300475866757No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG15612.210797643326535No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA13301.883639247677317No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT10361.4672558350328573No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT9751.3808633582596872No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC9351.3242125538182643No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA9231.3072173124858373No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGCCATCA6980.9885565375028325No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGTGGGAGGATTGCTTGAGTC6830.9673124858372989No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC5870.8313505551778835No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG5670.803025152957172No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA5600.7931112621799229No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT5210.7378767278495355No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA5070.7180489462950375No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT5040.7138001359619306No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG4880.6911398141853614No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA4720.6684794924087922No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG4600.6514842510763652No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA4300.608996147745298No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC4130.5849195558576932No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG3700.5240199410831634No Hit
CATAGATGTGAGCACTACTGATAATCCCTCATTACTCTGGTTCTATGTGT3570.5056084296397009No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG3540.5013596193065941No Hit
CATAGAGTGGGGGACTAGCATTGATTCTATGTGTAGAACCATGTCGTCAG3300.4673691366417403No Hit
CATAGATCCACTGTGCTATCTCTGACACCGTAAGGTGGGAGGATTGCTTG3230.45745524586449127No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC3220.45603897575345576No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA3220.45603897575345576No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2700.3823929299796057No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA2680.37956038975753453No Hit
CATAGACTGGCGGTGATTGCTTTCCTACTTGGCCTCAGTTTCCCCTCCTT2640.37389530931339227No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2590.3668139587582143No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG2540.3597326082030365No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATAGATTTATCCAGCATGCC2250.31866077498300477No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA2220.314411964649898No Hit
CATAGACTGGCGGTGATTGCTTTCCTTTGGCCTCAGTTTCCCCTCCTTCT2130.30166553365057786No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA2060.29175164287332883No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT1970.2790052118740086No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATGTGGCATGGAGAAGGGTCT1770.25067980965329706No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1550.21952186721051437No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTCAGTCTGCATAGCCA1530.21668932698844326No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG1510.2138567867663721No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG1440.20394289598912305No Hit
CATAGACCTGACCTCATGATCGGCCTGTGTTCTTTGCATGATCTATGTGT1420.20111035576705188No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGCAGACCATCTTCTATGTGTA1360.19261273510083843No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTATGCTGAAGTCCCATGAT1290.1826988443235894No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG1270.17986630410151824No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA1250.1770337638794471No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1230.17420122365737592No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGAGACTTGGCCTCAGTTTCCCCTC1120.1586222524359846No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTCTCATAGAGGGGAGACACTG1110.157205982324949No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAGAGACTCAGTCTGC1030.14587582143666442No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAGGATTGCTTGAGTCTATGTGTA970.13737820077045093No Hit
CATAGACCTGACCTCATGATCTGCCTGAGACTTGGCCTCAGTTTCCCCTC940.1331293904373442No Hit
CATAGATTAGGGGTGACGGACTAGCCAGTGTCTCCCGGATTCAAGCAATT920.13029685021527304No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTTGAGGTAAAACTAT890.1260480398821663No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT890.1260480398821663No Hit
CATAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTCGTCAGTG850.12038295943802402No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA850.12038295943802402No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC810.11471787899388171No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG740.10480398821663267No Hit
CATAGACTTTTCCTCCAATATAGCTGCACACTACAATTACAGTACTAGAT730.1033877181055971No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)