FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807001

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807001
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159558
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA118547.429273367678212No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT114097.150377919001241No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA95435.9808972285939905No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG94695.934519109038719No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA82625.178054375211522No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA72344.5337745522004536No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG69304.343248223216635No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT51523.228919891199439No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA36272.273154589553642No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG34252.1465548577946576No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG33252.0838817232605074No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA27611.7304052444878977No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT25201.5793629902605948No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA24441.5317314080146405No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC21081.3211496759798944No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA17321.0854986901314883No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG14470.906880256709159No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT14120.8849446596222064No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA14000.8774238834781083No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT13960.8749169580967423No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT12330.7727597488060768No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA12150.7614785845899297No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA11940.7483172263377581No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10890.6825104350768999No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTAGAA10650.6674688827887039No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10410.6524273305005076No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT9840.6167036438160418No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8800.5515235839005251No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT8660.5427493450657441No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC7860.49261083743842365No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG7400.4637811955527144No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG7230.4531267626819087No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7080.4437257925017862No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT7050.44184559846576166No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG6700.41991000137880896No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT6330.3967209416011732No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC6240.39108035949309966No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6110.3829328520036601No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCTCAGTTGTGTGTGTGG5590.3503428220459018No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGCCTGTTCACTCTGATGGTACTT5140.32213991150553406No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG5120.32088644881485107No Hit
CATAGAACATCTACAGAACTCTCTACCCACAGTGAAACAAGATCGTGCCT4470.2801489113676532No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT4360.2732548665688966No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT4210.263853896388774No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA4170.26134697100740795No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG4160.2607202396620665No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3990.25006580679126084No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTAGAACAGCTAAAAATCTTGG3920.24567868737387033No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3900.2444252246831873No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTCTACACATAGAACAGC3880.24317176199250432No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTGACGACATGTGTGAGAGGGAA3850.2412915679564798No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT3820.23941137392045525No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3770.2362777171937477No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG3630.22750347835896662No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT3560.2231163589415761No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCCCTCATTATCCCTGTGCCTC3530.2212361649055516No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3410.2137153887614535No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3240.20306095589064793No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA3210.20118076185462339No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3170.19867383647325737No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA3160.19804710512791585No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3140.19679364243723285No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG3070.19240652301984232No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3000.18801940360245178No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACATAGAACAGCTAAAAA2960.18551247822108577No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGAGGGTGGGGAAAGAGAGCA2910.18237882149437823No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT2870.17987189611301221No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2830.17736497073164617No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2730.17109765727823112No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA2620.16420361247947454No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTATACGGTAGCAAACTAA2560.16044322440742553No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2490.15605610499003497No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT2390.14978879153661992No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2370.1485353288459369No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2360.1479085975005954No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2360.1479085975005954No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA2340.14665513480991238No Hit
CATAGACTCTGTTTTGCTACCTGGGGTTCTGCACATCTACAAGGACACTC2330.14602840346457086No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACATGTGTGAGAGGGAAGGACTC2330.14602840346457086No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2270.14226801539252185No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT2250.14101455270183882No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGAGGACACTTTGGACTCTG2240.14038782135649733No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA2160.13537397059376527No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2150.13474723924842377No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC2060.12910665714035022No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2060.12910665714035022No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA2050.12847992579500872No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT1980.12409280637761817No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGAACAGCTAAAAATCTTGGAGC1950.12221261234159365No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1820.11406510485215408No Hit
CATAGATGTGCCACATACCTTTCCCATACACGGACTACAAGTACCCACCA1780.11155817947078805No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAACAGCTAAAAATCT1770.11093144812544654No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1760.11030471678010505No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG1760.11030471678010505No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1740.10905125408942204No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1730.10842452274408053No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTGGAGACAGCCG1720.10779779139873903No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC1700.106544328708056No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1650.10341067198134848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)