FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159558
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT118337.416112009426039No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT112557.053861291818649No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA94715.9357725717294025No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA93185.839882675892152No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT82045.141703957181715No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA72744.558843806014114No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG69364.347008611288685No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT50063.137417114779579No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA36282.2737813208989834No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG34162.140914275686584No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG33222.0820015292244825No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA27531.7253913937251657No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT25251.5824966469873025No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA24481.5342383333960063No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA20971.3142556311811378No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA17221.0792313766780732No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG14110.8843179282768648No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT14080.8824377342408404No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT14000.8774238834781083No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA13680.85736848042718No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT12330.7727597488060768No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT12160.7621053159352712No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA11990.7514508830644656No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10750.6737361962421189No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTAGACTTGGTCTCATAG10480.6568144499178982No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10360.6492936737738001No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT9710.6085561363266022No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8820.5527770465912082No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT8680.5440028077564272No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC7930.49699795685581416No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC7450.4669148522794219No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG7200.45124656864588425No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC7050.44184559846576166No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6910.4330713596309806No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG6730.4217901954148335No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC6380.39985459832788073No Hit
CATAGAGTCCTTCCCTCTCACACATGTATATCTAGGAGTAGAACTGCTGG6190.38794670276639215No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6100.3823061206583186No Hit
CATAGACCACACACACAACTGAGAGTGATCTACAGTTTCAATACTATGCC5600.3509695533912433No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG5090.31900625477882655No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTCATAGGGCACTGAGACCACAT4920.3083518219080209No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC4360.2732548665688966No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGGTAGAGAGTTCTGTAGATGTT4350.27262813522355506No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT4240.2657340904247985No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG4190.26260043369809094No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA4190.26260043369809094No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3960.24818561275523635No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3920.24567868737387033No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTCCCCAGGTAGCAAAAC3890.2437984933378458No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGACCTTTTTCTGTAGTCAAG3870.2425450306471628No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT3870.2425450306471628No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3840.2406648366111383No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGAAGTGTATTA3810.23878464257511373No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGGCAACATATCAGAAGCATC3560.2231163589415761No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3560.2231163589415761No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3450.21622231414281956No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT3450.21622231414281956No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3290.20619461261735544No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA3180.19930056781859887No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC3160.19804710512791585No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG3130.19616691109189136No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3100.19428671705586684No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3030.18989959763847628No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2980.18676594091176876No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACATAGGAGGAGCTGACTTACTG2970.18613920956642727No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGAGGAGAATGATATTG2880.1804986274583537No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2860.1792451647676707No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2770.17360458265959713No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2750.17235111996891414No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT2620.16420361247947454No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTATACTTTTCTAA2490.15605610499003497No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT2450.15354917960866896No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2400.15041552288196142No Hit
CATAGAGTCCTTCCCTCTCACACATGTCCCCCAGGTAGCAAAACAGAGTC2380.1491620601912784No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2360.1479085975005954No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCCCAGGTAGCAAAACAGA2320.14540167211922936No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT2290.14352147808320484No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT2290.14352147808320484No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2270.14226801539252185No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTCCCCAGGTAGCAAAACAG2210.1385076273204728No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT2200.13788089597513128No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2190.1372541646297898No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA2160.13537397059376527No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2150.13474723924842377No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2080.13036011983103324No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT2020.12659973175898417No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGATAGCGAGAAGAGTGGAGG2020.12659973175898417No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCCCAGGTAGCAAAACAGAG1920.12033241830556915No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG1910.11970568696022763No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1810.11343837350681256No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1800.11281164216147106No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGCATTCTCTCAGGG1760.11030471678010505No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1750.10967798543476354No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG1740.10905125408942204No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTATGGGAAAGGTATGTGGCA1710.1071710600533975No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAAATACAAAACTTATCTGGGCA1710.1071710600533975No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1670.10466413467203148No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1670.10466413467203148No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1600.10027701525464093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)