FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807007

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807007
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87480
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1194413.653406492912664No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1017811.634659350708732No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG58346.668952903520804No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG51055.835619570187472No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG42654.875400091449475No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA36234.141518061271148No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC31653.617969821673525No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG23502.686328303612254No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT19542.2336534064929126No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA17331.9810242341106536No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA15921.8198445358939184No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT14101.6117969821673523No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC12531.4323273891175126No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA12181.392318244170096No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC9731.11225422953818No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA8530.9750800182898948No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6890.7876085962505716No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC5840.6675811614083219No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC5230.5978509373571101No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG4960.566986739826246No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT4940.5647005029721079No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA4350.4972565157750343No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGACGACATGGTTCTACACATAG4170.4766803840877915No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA3900.4458161865569273No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT3620.41380887059899407No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3510.4012345679012346No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3260.37265660722450844No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT3200.36579789666209417No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTTCTACACAT3170.36236854138088703No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3110.35550983081847276No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2820.3223593964334705No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2800.3200731595793324No Hit
CATAGAAGGACAAAGACATTTAGGACCCCCCACGCTGTCCTTCTCTGAAT2780.3177869227251943No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA2630.3006401463191587No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT2470.28235025148605397No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG2370.2709190672153635No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG2310.26406035665294925No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG2290.26177411979881116No Hit
CATAGAAGGACAAAGACATTTAGGACCCCATAGACTGTGTGCTTGAACCA2290.26177411979881116No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2140.2446273433927755No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT1910.2183356195701875No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1890.21604938271604937No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1880.21490626428898033No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1790.20461819844535892No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1780.20347508001828987No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTACCAGTTATTAGTTGAATGAG1660.18975765889346136No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGACATGGTTCTACAC1650.1886145404663923No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1600.18289894833104708No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1550.17718335619570186No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA1530.1748971193415638No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG1510.1726108824874257No Hit
CATAGAAATGATGCTGAAGGGCCTGCGAAATGATGCTGAAGTGATGGGCT1450.16575217192501143No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA1410.16117969821673525No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1350.15432098765432098No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACACATAGAAATGATGCTGAAGT1340.15317786922725193No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGGTTCTACACATAGAGATCCC1340.15317786922725193No Hit
CATAGAAATGATGCTGAAGGGCCTGGACATGGTTCTACACATAGAAATGA1290.1474622770919067No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGACATGGTTCTACAAA1160.13260173754000915No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1150.1314586191129401No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1120.12802926383173296No Hit
CATAGAAATGATGCTGAAGGGCCTGGAAATGATGCTGAAGTGATGGGCTA1110.12688614540466392No Hit
CATAGAGTGCCTGTTTCCTCATTCGTATAGAGTGTCTGTTTCCCCACTCA1110.12688614540466392No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1090.12459990855052583No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGGCTCAGGTATGTCTTTATTAG1090.12459990855052583No Hit
CATAGAAATGATGCTGAAGGGCCTGGACGACATGGTTCTACACATAGAAA1050.12002743484224966No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1030.11774119798811157No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1010.11545496113397348No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT990.11316872427983539No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTACCACGCTGTCCTTCT960.10973936899862827No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT950.10859625057155922No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA950.10859625057155922No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGACGACATGGTTCTACACATAG920.10516689529035209No Hit
CATAGAGAAGACTCCCTCAACCCACCCGGCCCCTGATGCTGCTTGGACAA910.10402377686328304No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGACATGGCTCAGGTAT910.10402377686328304No Hit
CATAGACCCAAGACCCCAGCCTTTACTCTCTTAGTTCTGACATTTCACAA900.102880658436214No Hit
CATAGATGAGGACACCATAAAGACAACAACACTGCCCTCTCTGCTGTTCC900.102880658436214No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGACATGGTTCTACACATAGAGTGT880.1005944215820759No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG880.1005944215820759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)