FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807015

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807015
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101179
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1754817.343519900374584No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA43204.269660700342957No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31933.155793198193301No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG31913.1538165034246237No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA24822.453078207928523No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT23212.2939542790500007No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG19451.9223356625386692No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG16251.606064499550302No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT15091.4914162029670188No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT13031.2878166417932575No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA11941.180086776900345No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA11831.16921495567262No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA11381.1247393233773808No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT10941.0812520384664803No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10151.003172595103727No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT9840.9725338261892289No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA9560.944860099427747No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8650.8549204874529299No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC8310.821316676385416No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8150.8055031182359975No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7640.7550974016347266No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6730.6651577896599097No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC6500.6424257998201207No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5750.5682997459947222No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5740.5673113986103836No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA5730.566323051226045No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA5430.5366726296958855No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA4830.4773717866355666No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4780.4724300497138735No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT4370.43190780695598885No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC4250.42004763834392517No Hit
CATAGAAGGAGCTGGACTGGATGGACTACGGTCCAGTGAACTCAAGGGGG4150.41016416450053866No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3860.3815020903547179No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT3750.37063026912699276No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA3650.36074679528360626No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3610.3567934057462517No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3510.34690993190286523No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3390.33504976329080144No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTACGGAGATAGAGAGGTTGGTT3300.3261546368317536No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAACAGCTAAAAATCTTG3180.31429446821968987No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGCGGTCATTCTTC3070.3034226469919647No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2970.2935391731485783No Hit
CATAGACCCCATGTGCAGTGTAAGCTACATAGACATGTGTGAGAGGGAAG2960.2925508257642396No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG2940.2905741309955623No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT2940.2905741309955623No Hit
CATAGAAGTGACCCTCAGCTCAGTGATTGGGGATGGCTGGTTGAATCTAT2860.2826673519208531No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA2810.27772561499915993No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTAATGGAGGAGTATGGGATCT2780.27476057284614397No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA2750.271795530693128No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT2730.2698188359244507No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2650.26191205684974156No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGGGTGGGGAAAGAGAGCA2640.2609237094654029No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2600.2569703199280483No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAACTTAGCAACCTGTACATT2480.24511015131598457No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT2430.2401684143942913No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2380.2352266774725981No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC2320.22929659316656617No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA2300.2273198983978889No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT2270.22435485624487297No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGTGGAGG2230.22040146670751834No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT2220.2194131193231797No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG2210.21842477193884108No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG2200.21743642455450243No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG2190.2164480771701638No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2150.21249468763280915No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT2100.20755295071111596No Hit
CATAGATGTGGTCTCAGTGCCCTATGTGACAGTGAAACAAGATCGTGCCT2080.20557625594243867No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGTGT2040.20162286640508403No Hit
CATAGATGTGCCACATACCTTTCCCAGTTCTGGTGGAGGGCTTTGCTGTT2020.19964617163640677No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGAGGGTGGGGAAAGAGAGCACT2000.19766947686772948No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG1980.1956927820990522No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC1960.19371608733037488No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTATGAGACCAAGTA1890.18679765564000436No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1850.18284426610264976No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1780.17592583441227921No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGAGGGTGG1780.17592583441227921No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT1740.17197244487492463No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAACCTGGTGGAGGGCTTTG1720.16999575010624735No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCACAGTGAAACAAGATCGTG1710.1690074027219087No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGGCTGAGAAAGGAGGATCAC1710.1690074027219087No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT1660.16406566580021545No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT1660.16406566580021545No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCATACAGTGAAACAAGATCGTG1650.1630773184158768No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1630.16110062364719951No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT1590.15714723410984494No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1590.15714723410984494No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC1550.15319384457249036No Hit
CATAGATGTGGTCTCAGTGCCCTATGTACGGAGATAGAGAGGTTGGTTCT1530.15121714980381304No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC1500.1482521076507971No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTACACATAGAATTTGCAAATA1500.1482521076507971No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGGGTAATGGAGGAGTAT1450.14331037072910388No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGTGTGAGAGGGA1450.14331037072910388No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT1440.14232202334476524No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA1440.14232202334476524No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAGAACAGCTAAAAATCT1430.14133367596042656No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC1420.14034532857608792No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC1420.14034532857608792No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGGAGAGGAGGGGGCAGAATATCT1420.14034532857608792No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA1410.13935698119174927No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTCTCATAGAGGCACAGGGTAA1400.13836863380741063No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1380.1363919390387333No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1340.13243854950137876No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA1320.13046185473270144No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1290.1274968125796855No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1290.1274968125796855No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1240.12255507565799229No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1240.12255507565799229No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA1240.12255507565799229No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT1230.12156672827365361No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1220.12057838088931497No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT1210.11959003350497632No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCCCCCCCCATAGAACAG1200.11860168612063768No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1180.11662499135196037No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1160.11464829658328309No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATAGACAGCTGGTGGAGGGC1160.11464829658328309No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA1150.11365994919894445No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACAGTGAAACAAGATCGTGC1150.11365994919894445No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA1140.11267160181460581No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1130.11168325443026714No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1120.11069490704592849No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1100.10871821227725122No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1090.10772986489291257No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT1090.10772986489291257No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1080.1067415175085739No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTTTCTATGAGACCAAGTCTCTGC1060.10476482273989662No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTTAGCAAACTAACACAGAAAC1040.10278812797121933No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGGACACTTTGGACTCTG1030.10179978058688066No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)