FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807016

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807016
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101179
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1711016.910623746034258No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT41904.141175540378932No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG31603.1231777345101257No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA31263.0895739234426114No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA24342.4056375334802675No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT23112.284070805206614No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG19151.8926852410085095No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG15921.5734490358671267No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT14421.4251969282163295No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT12411.2265391039642615No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA11771.163284871366588No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11441.1306694076834125No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA11021.0891588175411895No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10441.031834669249548No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9820.9705571314205517No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT9770.9656153944988585No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA9530.9418950572747309No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8600.8499787505312366No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8090.7995730339299657No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT8070.7975963391612884No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA7620.7531207068660493No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6550.647367536741814No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT6150.6078336413682681No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5590.5524861878453038No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5480.5416143666175788No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT5380.5317308927741923No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA5240.5178940293934512No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4820.476383439251228No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4700.4645232706391642No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT4260.42103598572826373No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC4110.4062107749631841No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT4090.4042340801945068No Hit
CATAGACCCCCTTGAGTTCACTGGACCGTAGTCCATCCAGTCCAGCTCCT4040.39929234327281354No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3710.3666768795896382No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC3690.3647001848209609No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA3660.36173514266794493No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT3580.3538283635932358No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA3430.339003152828156No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGTCACTGACAGGTCTTAAAGCT3290.325166289447415No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3240.32022455252572174No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC3100.3063876891449807No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCATAGACTCTGTTTACTCGGAGA3000.2965042153015942No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTAGCTTACACTGCACATG2960.2925508257642396No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT2950.29156247837990096No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCCCCAGGTAGCAAAACAGA2920.28859743622688505No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG2900.28662074145820776No Hit
CATAGATTCAACCAGCCATCCCCAATCACTGAGCTGAGGGTCACTTCTAT2880.28464404668953047No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGAAAGGTATGTGGCACATCT2800.27673726761482126No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG2790.27574892023048264No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA2640.2609237094654029No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2610.257958667312387No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT2600.2569703199280483No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGTCTTCAGCTCTTTGAGGC2520.24906354085333912No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2430.2401684143942913No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2350.2322616353195821No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTTACGATAGCGAGAAGAGTGGA2330.23028494055090482No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC2290.22633155101355026No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2270.22435485624487297No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC2270.22435485624487297No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTAGGAAACATTGG2260.22336650886053427No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2250.22237816147619563No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAGTCCATCCAGTCCAGCTCCTT2230.22040146670751834No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2190.2164480771701638No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2170.2144713824014865No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2160.2134830350171478No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCAGGGCAGAGAGTG2130.21051799286413186No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2090.2065646033267773No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT2060.20359956117376132No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2040.20162286640508403No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACATAGGGCACTGAGACCACAT2000.19766947686772948No Hit
CATAGAAACAGCAAAGCCCTCCACCAGAACTGGGAAAGGTATGTGGCACA1980.1956927820990522No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCATAGGAGGAGCTGACTTACTGTT1960.19371608733037488No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACTTTTCTAATCAA1940.19173939256169759No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG1930.19075104517735894No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1800.17790252918095653No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACTTGGTCTCATAGAGGC1780.17592583441227921No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1750.17296079225926328No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTTGGTCTCATAGAGGAGAATGAT1710.1690074027219087No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACATAGGAGGAGCTGACTTACTGT1670.1650540131845541No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTTTCTGTTTACTCGGAGATTTG1650.1630773184158768No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGATAGCGAGAAGAGTGGA1630.16110062364719951No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGTCTCATAGGGCACTGAGACCA1630.16110062364719951No Hit
CATAGAGGCACGATCTTGTTTCACTGTATGGGTCACTGACAGGTCTTAAA1630.16110062364719951No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT1620.16011227626286087No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1590.15714723410984494No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT1570.15517053934116762No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCTGTTTACTCGGAGATTTG1560.15418219195682897No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTATGTGTAAGGAAACATTG1480.1462754128821198No Hit
CATAGATCCCATACTCCTCCATTACCCTACACTGAAGCAGAGGTAGATGG1470.14528706549778114No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT1460.14429871811344253No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1450.14331037072910388No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG1420.14034532857608792No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCCCCAGGTAGCAAA1400.13836863380741063No Hit
CATAGAACCAACCTCTCTATCTCCGTACATAGGGCACTGAGACCACATCT1390.13738028642307198No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT1390.13738028642307198No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGGGAAAGGTATGTG1360.13441524427005605No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC1350.1334268968857174No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT1350.1334268968857174No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATGAGACCAACCAA1340.13243854950137876No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1340.13243854950137876No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT1330.1314502021170401No Hit
CATAGATATTCTGCCCCCTCCTCTCCGATAGCGAGAAGAGTGGAGGCTCT1280.12650846519534686No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1280.12650846519534686No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1250.12354342304233092No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA1240.12255507565799229No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1230.12156672827365361No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1230.12156672827365361No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT1230.12156672827365361No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGTCAGTGTCAGGGCAGAG1220.12057838088931497No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1190.11761333873629905No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT1170.11563664396762173No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGGGGGGACTCTGTTTAC1160.11464829658328309No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCTGTCTATGAGGAATCTTTGGGA1130.11168325443026714No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1130.11168325443026714No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA1130.11168325443026714No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1130.11168325443026714No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT1100.10871821227725122No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1090.10772986489291257No Hit
CATAGAGGCACGATCTTGTTTCACTGTGATCTACAGTTTCAATACTATGC1080.1067415175085739No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1070.10575317012423525No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1060.10476482273989662No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC1060.10476482273989662No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA1040.10278812797121933No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGGACTAGCACTATTC1040.10278812797121933No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1020.10081143320254202No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)