FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142993
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4795833.53870469183806No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG84695.922667543166449No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG68644.800234976537313No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT49503.4617079157721005No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC48423.386179743064346No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG38402.6854461407201753No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG34772.4315875602302213No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA31722.2182904058240616No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG18121.2671948976523326No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG15441.0797731357479037No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT15371.0748777912205494No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT12020.8406005888400131No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA10360.7245109900484639No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC8970.6273034344338534No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC8910.6231074248389782No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT8770.6133167357842692No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA8220.5748533144979125No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT8070.5643632905107243No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT7680.537089228144035No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT7500.5245011993594092No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA7440.5203051897645339No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC7330.5126125055072626No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA6110.4272936437447987No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA6100.42659430881231947No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG6030.421698964284965No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTTCAGAACGCGGCAAATG5410.37834019847125383No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG5260.36785017448406565No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA4640.3244914086703545No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT4570.319596064143No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC4280.29931535110110286No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA4260.29791668123614445No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTTGCTCATCCATTGTTGATC4240.296518011371186No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC4200.2937206716412692No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCAGAGACTTGGCCTCAGT3870.2706426188694551No Hit
CATAGATTAGGGGTGACGGACTAGCCTTGGCCTCAGTTTCCCCTCCTTCT3710.25945325994978774No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA3640.2545579154224333No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT3300.23078052771814006No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACAACACAGGATCCAGGTG3140.21959116879847265No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG3030.21189848454120133No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTGGCCTCAGTTTCCCCTCCTTCT3020.2111991496087221No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG3000.20980047974376367No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC2980.20840180987880524No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT2980.20840180987880524No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG2980.20840180987880524No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG2910.20350646535145078No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT2700.18882043176938731No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA2690.1881210968369081No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2620.18322575230955362No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2600.1818270824445952No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT2470.17273572832236542No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG2430.16993838859244859No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2430.16993838859244859No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2390.16714104886253175No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2360.1650430440650941No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT2330.16294503926765647No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2320.16224570433517724No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTT2260.15804969474030198No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG2220.15525235501038512No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2110.1475596707531138No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2070.14476233102319694No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT2050.1433636611582385No Hit
CATAGATACGATCATAAGGGTGGGGCCTTGGCCTCAGTTTCCCCTCCTTC2030.1419649912932801No Hit
CATAGACCTCCTTTCCTCCACGGCAATAGACCTCCAAGCAGATCTGTGTT1980.13846831663088402No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA1960.1370696467659256No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGGAAGTAGGGAATGATTACAAGTT1920.13427230703600876No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1900.13287363717105033No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTCAGTCTGCATAGCCA1890.1321743022385711No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG1830.12797829264369587No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1780.12448161798129978No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCGTTTAGTGATAAGGACACAGCC1730.12098494331890372No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT1720.12028560838642452No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1710.11958627345394529No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTCCCATGCCATGCT1690.11818760358898686No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA1660.11608959879154923No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA1580.11049491933171553No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)