FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24355
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG423217.37630876616711No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA16146.626975980291522No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT14105.789365633340177No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG14015.752412235680558No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT13535.555327448162595No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7152.935742147402997No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA6242.562102237733525No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5422.225415725723671No Hit
CATAGACCATCCTCCCACCTTGACCTCTCCTCCCATCTCAAGTCTCACTC5272.163826729624307No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT4771.9585300759597617No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4441.823034284541162No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA4261.7491274892219257No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTAGGGATAGTTTGAGGGTAAT4201.7244918907821802No Hit
CATAGAATTCTGTCCTATCTTGCTACTGGTAGACTTCAGCCACCCCATCC4191.7203859577088894No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG4141.699856292342435No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGATGGGTTTTTGCCAGA4131.695750359269144No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCCGGCCACATTATTTTCTATG3511.4411825087251078No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTTAAAGTGGGGAAAGGACACC3141.2892629850133441No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGCCCGGCCACATTATTTTC2591.0634366659823444No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2571.0552247998357627No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG2541.04290700061589No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2170.8909874769041265No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC1940.7965510162184356No Hit
CATAGACCGGGGGTAGATAGGTGGTTGGGAGTTCGAGACCAGTCTATGTG1870.7678094847053993No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTACTCCTAT1740.7144323547526176No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1660.6815848901662902No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACATGTAGGATGGGTTTTTGC1590.6528433586532539No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT1240.5091357010880723No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1140.4680763703551632No Hit
CATAGAGTTTTGTTCCCTTGCTGGCTTCCCTGCTTGTCTTTCATCTATGT950.390063641962636No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCACCCCATCCTACATGTG880.36132211044959966No Hit
CATAGACTCAAGAAACTTACAATCATGGCACCCAGTACAGGAGCACCCTC720.2956271812769452No Hit
CATAGAGGTAGGCATTTCATCTATATTGCAACTGAGGTGTCCTTTCCCCA700.28741531513036334No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG660.27099158283719976No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG660.27099158283719976No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA650.2668856497639089No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT490.20119072059125437No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCAGTACAGGAGCACCCTCTATGTG480.19708478751796343No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG480.19708478751796343No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCATTTTAACACAGCATTGAAG480.19708478751796343No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT480.19708478751796343No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGCTATATAGAAGTACATGG470.19297885444467255No Hit
CATAGAAGGTGATAATCATGACAGCCATGCTGAAGTCCCATGATCTATGT460.18887292137138165No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGTTTGTCTTCCATGCTTCTA410.1683432560049271No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTGATCCCATCTCA400.1642373229316362No Hit
CATAGATTGCACATAAAGTCTGATCACATCTCAAGTCTCACTCTTCTATG380.1560254567850544No Hit
CATAGAGGTGAGCGGCTGTCTCCATAACCATGTCGTCAGTGTACTCCTAT360.1478135906384726No Hit
CATAGACTCAAGAAACTTACAATCATGGCATACGGTAGCAGAGGCACTTG340.1396017244918908No Hit
CATAGATTGCACATAAAGTCTGATCCCATAGCTTCCCTGCTTGTCTTTCA330.13549579141859988No Hit
CATAGAGGGACGGAGGCACTTGGTCCAGACTTTCTATGTGTAGAACCATG330.13549579141859988No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCCCGGCCACATTATTTTCTATGTG320.13138985834530897No Hit
CATAGAAGCAGCATTGATCATCCTCCACCTTTCCCCATCTCCAACCCTCT300.12317799219872716No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT290.11907205912543625No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGCCATGCTGAAGTCCCATGA290.11907205912543625No Hit
CATAGACTACCACTACCCAGCACAGCACCCAGTACAGGAGCACCCTCTAT290.11907205912543625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)