FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90463
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC70047.742391917137394No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA67287.437294805611133No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA61186.762985972165415No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC43244.77985474724473No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA29983.3140621027381365No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT28173.113980301338669No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA23072.550213899605364No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT21832.4131412842819713No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA17481.932281706332976No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT16321.804052485546577No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA14671.621657473221096No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG14471.5995489868786135No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG13821.5276964062655451No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA12711.4049943070647668No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC12561.388412942307905No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG10471.157379260028962No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10431.1529575627604656No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT9361.034677160828184No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT9301.028044614925439No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA8940.9882493395089705No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7960.879917756430806No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7770.8589146944054475No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT7740.855598421454075No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG7660.8467550269170822No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC7570.8368062080629649No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA6940.7671644760841448No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT6780.7494776870101588No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6720.7428451411074141No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT6330.6997335927395731No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5990.6621491659573527No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5800.6411461039319943No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG5560.6146159203210152No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC5170.5715043719531742No Hit
CATAGACCCACTTACACACACAGGTTTTGCCAAGATTGTAGGAGTAGATC5160.5703989476360501No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA5020.5549230071963124No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4420.48859754816886464No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCACAGCCCAGTTTTCCTTCTCT4350.48085957794899575No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAGGGCAAGTGTATGGTCAG4340.47975415363187157No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT4330.4786487293147475No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3890.4300100593612858No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA3820.4222720891414169No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3810.4211666648242928No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3690.40790157301880325No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG3660.4045853000674309No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG3630.40126902711605844No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT3450.38137138940782417No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG3420.3780551164564518No Hit
CATAGAAAAGTCACCATGCAGCCCTGTTTTCCTTCTCAGCCTTCTCTGAT3410.3769496921393277No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC3390.3747388435050794No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3330.36810629760233465No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG3300.3647900246509623No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG3090.34157611399135557No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA3080.34047068967423144No Hit
CATAGACCCCCATGCAACCACATCTATGAGAAGCCTTCTCTGATACCATC3020.3338381437714867No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2990.3305218708201143No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT2990.3305218708201143No Hit
CATAGATGTGTGAGAGAGGGAGAGACAAGCACATTATTATTGGTTGGTTC2960.3272055978687419No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCATCAGAGCATCACCCCTTCTAT2920.32278390060024537No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2700.2984645656235146No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGAAAATGTCAGTGGGCCATC2680.29625371698926634No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGCCCTGTGATTGTCCTG2680.29625371698926634No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGGAATTAGAGCCAGTTCT2620.2896211710865216No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT2620.2896211710865216No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC2610.28851574676939745No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2320.25645844157279774No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2310.2553530172556736No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG2170.23987707681593579No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG2140.2365608038645634No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2090.23103368227894278No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1990.2199794391077015No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA1920.2122414688878326No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG1750.19344925549672243No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1740.1923438311795983No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGACTGGTGGTGCTGGAACTA1600.17686789073986048No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGAACAAGGGCATGGTCAAG1590.17576246642273635No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1500.16581364756861922No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTTAGGAGTTC1470.16249737461724684No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAATCCCTGCCCTTGTCCTTGCAC1470.16249737461724684No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC1420.15697025303162618No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1380.15254855576312967No Hit
CATAGAATTGCCTACTTTGGGACCCACCCGTAATCCCTCCCTTTTCTATG1340.14812685849463317No Hit
CATAGACCTGGTACTTCTCTTCTGGGTACACTGACGACAATGGGCACACT1250.13817803964051603No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTTGGTGAAAAGT1230.13596719100626775No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC1200.13265091805489537No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTGGCTCTCTGAGATGTGT1190.13154549373777125No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA1190.13154549373777125No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA1170.129334645103523No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA1160.12822922078639887No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC1150.12712379646927474No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG1140.1260183721521506No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG1110.12270209920077822No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCGTGTACAGCCTACATCCCTCATC1110.12270209920077822No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1060.11717497761515759No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCTCTGCTACCTGGCAAAAGGGT1020.11275328034666106No Hit
CATAGATGTCCCCATTCATCCTGCAACTCTCCTGGGCCCATAATACACTT1010.11164785602953693No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT980.10833158307816455No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATCTCAACTCCCAGCTCCTTCTA960.1061207344439163No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC960.1061207344439163No Hit
CATAGAATTGCCTACTTTGGGACCCATTGCAAACAGAATGGGACCCATCT930.10280446149254392No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA920.1016990371754198No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGGAGATGTTGGGAGGAACAGGG920.1016990371754198No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)