FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90463
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG70747.819771619336083No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT67467.457192443319369No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT61366.782883609873649No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG42424.689209953240551No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT29563.2676342814189225No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT27893.0830284204591933No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT22882.5292108375800053No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT21792.408719587013475No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT17471.9311762820158518No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT17331.915700341576114No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14401.5918110166587445No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG14391.5907055923416205No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG13761.5210638603628002No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT12591.3917292152592773No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG12541.3862020936736565No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG10421.1518521384433413No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10281.1363761980036036No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT9261.0236229176569427No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT9241.0214120690226944No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT8960.9904601881432188No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7910.8743906348451853No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG7910.8743906348451853No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT7730.854492997136951No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG7710.8522821485027027No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG7600.8401224810143373No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT6850.7572156572300277No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT6780.7494776870101588No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6710.7417397167902899No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6260.6919956225197043No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5980.6610437416402286No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5830.6444623768833667No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5650.6245647391751324No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5100.5637664017333053No Hit
CATAGATCTACTCCTACAATCTTGGCAAAACCTGTGTGTGTAAGTGGGTC5070.560450128781933No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCATTCTTTCTCCAGACCTTCATCT4370.483070426583244No Hit
CATAGAACTGACCATACACTTGCCCTTCCTGCTCACGATGGTATTACATG4370.483070426583244No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT4340.47975415363187157No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4330.4786487293147475No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA4050.4476968484352719No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3840.4244829377756652No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC3820.4222720891414169No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3690.40790157301880325No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG3670.405690724384555No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3660.4045853000674309No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG3600.3979527541646861No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT3540.3913202082619413No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGAGAAGGAAAACAGGGCTGCATG3380.3736334191879553No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC3380.3736334191879553No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3380.3736334191879553No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCCTCTTCTCTTCCCTCTATGTG3300.3647900246509623No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3280.362579176016714No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG3170.3504195085283486No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3110.3437869626256038No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTCTCATAGATGTGGTTGCATGGG3090.34157611399135557No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3000.33162729513723843No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCTCCCTCTCTCACACATC2990.3305218708201143No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT2990.3305218708201143No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTTGAAAGCTCCCTGGATCTAT2900.32057305196599717No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTAGGTGGCTTCTGGTGCATC2670.2951482926721422No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGGCTGCATGGTGACTTTTCTAT2630.2907265954036457No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTTGCAGGATGAATGGGGAC2620.2896211710865216No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGAGAAGGTAGGTGGCTTCTGGT2620.2896211710865216No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2600.2874103224522733No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2490.2752506549639079No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC2360.26088013884129424No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2330.25756386588992186No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT2300.2542475929385495No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG2150.23766622818168753No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2070.22882283364469452No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1960.2166631661563291No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1890.2089251959364602No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1830.20229265003371544No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGGCACAATGAGGCAATCTATG1710.1890275582282259No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGAACTTTCCCACCGCCCT1590.17576246642273635No Hit
CATAGAACTAGTTCCAGCACCACCAGTCAAAGCAGCAAACAATTTCAGAA1570.17355161778848813No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1500.16581364756861922No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT1460.16139195030012268No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCCCAAGGTCAAGG1430.15807567734875033No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC1430.15807567734875033No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1320.14591600986038492No Hit
CATAGAACTGTCCCCTACTTTTCACCAACTTGGTCTCATAGAACTTTCCC1250.13817803964051603No Hit
CATAGACAGGGGCCAGAACTCCTAAGGTCTCATAGACAGGGGTGTGGTGT1230.13596719100626775No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTACCCAGAAGAGAAG1220.13486176668914363No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGACACTTGAAAGCTCCC1200.13265091805489537No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT1160.12822922078639887No Hit
CATAGAACATCTCCCTGTTCCTCCCACTGTTCCCTCTGCCTAGATGCCCT1160.12822922078639887No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT1150.12712379646927474No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1140.1260183721521506No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1140.1260183721521506No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGCTCCTCTTCTCTTCCCTC1120.12380752351790235No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1090.12049125056652996No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1050.11606955329803345No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGAGTTGCAGGATGAATGGGGAC1030.1138587046637852No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAGCAGAGACTGGGTCCCAAAGTA1030.1138587046637852No Hit
CATAGAAGGAGCTGGGAGTTGAGATAGGAGTTGACAAACGACAGCTTCTA970.10722615876104043No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT960.1061207344439163No Hit
CATAGAACATCTCCCTGTTCCTCCCAACATCTCCCTGTCTCTCCCTCTCT950.10501531012679216No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG930.10280446149254392No Hit
CATAGACCAGGACAATCACAGGGCACAGTTAGGCTACTTGGGGGTCTCTA920.1016990371754198No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)