FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147266
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5597438.008773240259124No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG62934.273219887822036No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG42012.852661170942376No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC35402.403813507530591No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA34932.371898469436258No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA29992.03645104776391No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA29031.9712628848478262No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC24221.6446430269036982No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG20621.4001874159683836No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG17961.2195618812217348No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG13840.9397960153735417No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC13310.9038067170969537No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT10320.7007727513479011No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT8280.562247905151223No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC8260.5608898184238045No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA7550.5126777396004508No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA6700.4549590536851683No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG6550.4447734032295303No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC6310.42847636250050924No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA6100.41421645186261596No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT6030.40946314831665154No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATCTATGAGACCAAGTCTCAGCAT5890.3999565412247226No Hit
CATAGATCACCTACACAGACAGCTTTCCTACGGGGGCAGATTAACAGGTC5590.3795852403134464No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC5480.3721157633126452No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT5270.3578558526747518No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC4920.33408933494492954No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGCATGTTG4800.32594081458041907No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA4760.32322464112558225No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAATGGCATTAAATGACTTGCCCAA4430.30081621012317844No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTACCTTTCAGCATCTCTTT4300.2919886463949588No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT4250.2885934295764127No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGACGGAGTGAGGGCAGTAA4230.2872353428489943No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA4190.2845191693941575No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC3820.25939456493691687No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTACATACCTG3750.25464126139095244No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA3750.25464126139095244No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC3730.253283174663534No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA3710.2519250879361156No Hit
CATAGAAGATGGTCTGCTACACTGGTGCTGGGGTAGTTTTTCCAAATATA3680.249887957844988No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA3680.249887957844988No Hit
CATAGAGGGGCATGCTGGATAAATCTATATTCACCAAGTCACCCAGCCTC3500.23766517729822226No Hit
CATAGAGCCTGGGGTAGTTTTCTCTCATTTCCCCTCTCTCTGAATAACTC3450.23426996047967624No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG3370.2288376135700026No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG3360.22815857020629338No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3190.21661483302323684No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGGTCCTTTTCACATCATCTA3110.2111824861135632No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG3000.20371300911276197No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2970.20167587902163434No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2960.20099683565792514No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGACATGGTTCTACACA2940.1996387489305067No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT2930.1989597055667975No Hit
CATAGAAGATCCCATAGCAGCTTTGCCACATGGAGGGAAGGAAGGGCAAA2720.18469979492890418No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA2670.18130457811035813No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2610.1772303179281029No Hit
CATAGAACTTTGTGCCCCCAGTGTCTGCTACCAGGGATTATCAGTAGTGC2600.17655127456439368No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2500.16976084092730162No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT2460.16704466747246477No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG2450.16636562410875558No Hit
CATAGAAGATGGTCTGCTACACTGGTGTTCCACACTCATGCAAAGCTGGT2450.16636562410875558No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA2340.1588961471079543No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA2340.1588961471079543No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2320.1575380603805359No Hit
CATAGACCCTTCTCCATGCCACATCACACTGACGACATGGTTCTACACAT2240.15210571347086224No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2240.15210571347086224No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGCTCTGAGGAGGGAAGGAAGGGC2210.15006858337973464No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG2200.14938954001602542No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2170.14735240992489781No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT2090.14192006301522417No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1970.13377154265071367No Hit
CATAGACACCTGGATCCTGTGTTGTCTTAGGTAGAGGAGTTTCAAACATC1960.13309249928700448No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1910.12969728246845844No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1900.12901823910474924No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAAGGAAAGCAATCACCGCCAGTCT1880.1276601523773308No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1820.12358589219507558No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1800.12222780546765717No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCTTCTTATAGCCAGTGTCTCCCC1780.12086971874023876No Hit
CATAGAAGATCCCATAGCAGCTTTGCCTAATAGTTTTTCCAAATATAAGA1760.11951163201282035No Hit
CATAGATGTGGCTATGCAGACTGAGTCACATAGATTAAGTGCAGCTATAT1700.1154373718305651No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCTACCGTAGGAGGGAAGGAAGGGCA1640.11136311164830986No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA1630.11068406828460065No Hit
CATAGAAGATGGTCTGCTACACTGGTCATGGTTCCACACTCATGCAAAGC1620.11000502492089145No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1530.10389363464750859No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT1490.10117746119267176No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)