FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164290
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1648910.036520786414266No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT151579.22575932801753No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT71034.323452431675696No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG69224.213281392659321No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA67174.088502039077242No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG62553.8072919836873824No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA43342.638018138657252No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC33822.058554994217542No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA28421.729867916489135No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA28351.7256071580741372No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23301.4182238724207195No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG22751.3847464848743076No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT21691.3202264288757684No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGGAATCTTTGGGAGGCTATTA21351.2995313165743503No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT20071.2216203055572463No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA18371.1181447440501553No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGAAGACACAGCA15880.9665834804309452No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC14570.8868464300931279No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT14530.8844117109988435No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT13860.8436301661695782No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT13240.8058920202081685No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT13060.7949357842838882No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT12560.764501795605332No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAAACATTGGAAAGATG12190.7419806439832004No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT11450.6969383407389372No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATACGGCAACATATCAGAAGCA11380.6926775823239394No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11370.6920689025503682No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT11010.6701564307018077No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10590.6445918802118206No Hit
CATAGAGCCCCCAGAGAAGAATGACCACATAGGAGGAGCTGACTTACTGT10390.6324182847403981No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC9640.5867673017225637No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9520.5794631444397103No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG9270.5642461501004322No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8680.5283340434597358No Hit
CATAGAGGCACAGGGATAATGAGGGAGTACGGCAACATATCAGAAGCATC8640.5258993243654513No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT8530.5192038468561689No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGCATTCTCTCAGGGCTGTTCT7680.4674660661026234No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGAAAGGTATGTGGCACATCT7630.46442266723476777No Hit
CATAGAGGCACGATCTTGTTTCACTGTACGATAGCGAGAAGAGTGGAGGC6640.40416336965122646No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT6570.3999026112362286No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA6240.3798161787083815No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA6220.3785988191612393No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT6130.3731207011990991No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAGTACGGCAACATATCAGAAG6020.3664252236898168No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA5940.3615557855012478No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5680.34573011138839854No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG5560.33842595410554505No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5440.33112179682269155No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT5360.3262523586341226No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA5360.3262523586341226No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATAGGGCACTGAGACCACATCTA5180.31529612270984236No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGCAACATATCAGA5100.31042668452127337No Hit
CATAGAGGCACAGGGATAATGAGGGAGATGATAGCGAGAAGAGTGGAGGC4740.28851421267271293No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATACGGCAACA4650.2830360947105728No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC4360.26538438127701014No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGATAGCGAGAAGAGTGGAG4180.25442814535272995No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTACTAGCACTATTCTCTGG4120.2507760667113032No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGTAGCAGGAAACATTGGAAAG4050.2465153082963053No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT3940.23981983078702296No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3900.23738511169273846No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3700.225211516221316No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3500.21303792074989347No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA3450.20999452188203788No Hit
CATAGATATTCTGCCCCCTCCTCTCCCATAGGAGGAGCTGACTTACTGTT3430.20877716233489563No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT3410.20755980278775338No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG3320.20208168482561323No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT3240.19721224663704426No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3220.195994887089902No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG3220.195994887089902No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC3190.19416884776918863No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA3080.18747337025990626No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3050.1856473309391929No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT3020.18382129161847952No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT3000.18260393207133727No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2730.1661695781849169No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC2690.1637348590906324No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2520.1533873029399233No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC2510.15277862316635218No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2460.14973522429849656No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2430.1479091849777832No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAACTTATCTGGGCACGGTGGTC2240.13634426927993182No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG2170.13208351086493395No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1980.1205185951670826No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGCTACCGTATGTATATCT1910.11625783675208473No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT1870.11382311765780025No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTCTTGCTCCTTCTCACACAAATC1830.11138839856351575No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1790.10895367946923123No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1780.10834499969566011No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1720.10469292105423336No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)