FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117993
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2075917.59341655860941No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA44433.7654776130787417No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA39843.376471485596603No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG35202.9832278185994086No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31772.6925326078665686No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT25092.1263973286550897No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT17521.4848338460756145No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG17401.4746637512394805No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT16901.4322883560889204No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC15911.348385073690812No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC15431.3077046943462747No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG13291.126338003101879No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC13021.1034552897205765No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA12471.0568423550549608No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA12121.027179578449569No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA11851.0042968650682667No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA11680.9898892307170764No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC11630.9856516912020206No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11440.9695490410448078No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC10190.8636105531684084No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT8320.7051265753053146No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT8300.7034315594992924No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7600.6441060062885087No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7400.6271558482282847No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7370.6246133245192511No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA6980.5915605163018145No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6330.5364725026060868No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA6320.5356249947030757No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA6290.533082470994042No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG6070.5144372971277957No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6040.5118947734187622No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC5930.502572186485639No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC5700.4830795047163815No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG5660.4796894731043367No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT5580.4729094098802471No Hit
CATAGAAGGAGCTGGACTGGATGGACTCTATACATGTGTGAGAGGGAAGG5190.4398566016628105No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA5120.43392404634173215No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACATAGACCAAAGCTAGAAAC5070.42968650682667614No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTACATGTGTGAGAGGGAAGGAC4870.41273634876645227No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA4800.4068037934453738No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4780.4051087776393515No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG4760.4034137618333291No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA4350.3686659378098701No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGTGCCTGTTCACTCTGAT4260.36103836668276934No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA4180.35425830345867976No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCAGGGT4050.3432407007195342No Hit
CATAGACCACCGTGCCCAGATAAGTTTGCAGGGTAATGGAGGAGTATGGG4050.3432407007195342No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4040.34239319281652303No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTTGCCTTTCCTCAGTTCTTTTT3790.32120549524124314No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATAGACCAAAGCTAGAAACTCC3700.31357792411414237No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA3640.3084928766960752No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTTCTACACA3530.299170289762952No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAACAGCTAAAAATCTTG3510.2974752739569297No Hit
CATAGATGTGCCACATACCTTTCCCAGACACTGACGACAGTGAAACAAGA3450.2923902265388625No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3310.28052511589670576No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3270.27713508428466094No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC2950.2500148313883027No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACATTAGCTTAGTTAATTAGG2890.24492978397023554No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC2860.24238726026120194No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2830.23984473655216834No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC2810.23814972074614596No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG2800.2373022128431348No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2780.23560719703711236No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA2730.2313696575220564No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC2650.22458959429796682No Hit
CATAGATGCTTCTGATATGTTGCCGTCAGTAGGGTGGGGAAAGAGAGCAC2320.19662183349859738No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTGGTGGAGGGCTTTGCTG2300.19492681769257497No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2270.1923842939835414No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACACTGACGACATGTGTGAGAGG2270.1923842939835414No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGAGAACAGCTAAAAATCTTGGA2260.1915367860805302No Hit
CATAGATGCTTCTGATATGTTGCCGTTTCTACACATAGATGCTCAGATCT2190.18560423075945182No Hit
CATAGATGATCCATCTACCTCTGCTTCAGGACACTTTGGACTCTGCCTCT2170.18390921495342943No Hit
CATAGATGCTTCTGATATGTTGCCGTTACGGAGATAGAGAGGTTGGTTCT2160.18306170705041824No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2110.17882416753536226No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAGAACAGCTAAAAA2110.17882416753536226No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2040.1728916122142839No Hit
CATAGATGTGCCACATACCTTTCCCACTGACGACAGTGAAACAAGATCGT2010.1703490885052503No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT2010.1703490885052503No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGGCCTGTT1990.1686540726992279No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC1980.16780656479621672No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1980.16780656479621672No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGGGTCTATGAGACCAA1930.16356902528116077No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1930.16356902528116077No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG1930.16356902528116077No Hit
CATAGAATACAACACACTCTCTGCCCTGGTTCTGCACATCTACAAGGACA1920.16272151737814955No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCAGGGAAGCCCACACTTAGAAATG1910.16187400947513836No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1820.1542464383480376No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCCAAAGGGTGGGGAAAGAGAG1800.1525514225420152No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCGGTCATTCTTCTCTGGGGGC1800.1525514225420152No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1760.14916139092997044No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA1760.14916139092997044No Hit
CATAGACCCCATGTGCAGTGTAAGCTGTCCAGTGAACTCAAGGGGGTCTA1700.14407634351190324No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCTCTAACTTCATAGCACATCATG1700.14407634351190324No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGTTCACTCTGATGGTACTTCT1640.13899129609383606No Hit
CATAGAAGGAGCTGGACTGGATGGACATCTGGCTGAGAAAGGAGGATCAC1640.13899129609383606No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1630.13814378819082487No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA1600.1356012644817913No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT1570.1330587407727577No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1570.1330587407727577No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1550.13136372496673532No Hit
CATAGAGAACAGCCCTGAGAGAATGCGGTTCTACACATAGAGAACAGCTA1540.13051621706372413No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT1490.12627867754866814No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1480.12543116964565695No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA1470.12458366174264576No Hit
CATAGATGCTTCTGATATGTTGCCGTGGTTCTACACATAGATGCTCAGAT1460.12373615383963454No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC1410.11949861432457858No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1400.1186511064215674No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCGTTATCCTCAGCAAA1390.11780359851855618No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1330.112718551100489No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC1310.11102353529446661No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC1300.11017602739145542No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGATCTCCCTCATTATCCCTG1280.10848101158543304No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATCTCCCTCATTATCCCTGTG1260.10678599577941064No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1240.10509097997338825No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTTCTGCA1230.10424347207037706No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1210.10254845626435467No Hit
CATAGAGAACAGCCCTGAGAGAATGCGTTTGTGTCCTTTGCAGAGACGTG1210.10254845626435467No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1210.10254845626435467No Hit
CATAGAATACAACACACTCTCTGCCCTGTACGGTAGCAAACTAACACAGA1200.10170094836134345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)