FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41404
Sequences flagged as poor quality0
Sequence length150
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG424110.242971693556179No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC36308.767268862911797No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA29197.050043474060478No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA17064.120374843010337No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT14513.504492319582649No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT11942.8837793449908222No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA11482.772678968215631No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA10852.6205197565452614No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG9062.188194377354845No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT8292.002222007535504No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC7411.7896821563133998No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5901.4249830934209256No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT4871.176214858467781No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4861.1737996328857117No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA4521.091681963095353No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4501.0868515119312143No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA3930.9491836537532605No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTCTACACAT3810.9202009467684282No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3650.8815573374553184No Hit
CATAGAGATGTTTGATAAGCAGGGTGATCTATCCAGGAATTTTATTTTAA3580.8646507583808327No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC3560.859820307216694No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT3460.8356680513960003No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG3260.787363539754613No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA3250.7849483141725437No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCACCTCAACCAAAAGGT3230.780117863008405No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA3010.7269829002028789No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT2940.7100763211283935No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA2520.60863684668148No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2290.5530866582938846No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA2190.528934402473191No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1880.4540624094290407No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGCAAAACCCCATCTCTA1850.4468167326828326No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATTTCTA1850.4468167326828326No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA1780.429910153608347No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA1770.42749492802627764No Hit
CATAGACCAATAAAAGTTGATGGGATGAACACCTGATTGGCCATTTGAAC1450.35020770940005796No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA1420.3429620326538499No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1290.3115641000869481No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1250.30190319775867064No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCTACCAAAAAATAAAAAACAAAT1240.2994879721766013No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1200.28982706984832385No Hit
CATAGATCATGGGACTTCAGCATGGCCAGGATATAAGCAGGCAGAAAAAC1090.26325958844556085No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG1080.26084436286349144No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC1060.2560139116993527No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG930.22461597913245096No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCTGTCTCTG930.22461597913245096No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA900.2173703023862429No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA890.2149550768041735No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA830.2004637233117573No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA830.2004637233117573No Hit
CATAGAGCGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA820.19804849772968794No Hit
CATAGAGCAACAGGGACTCTCATTCAACACTGACTGATACAGGAAGGCCT820.19804849772968794No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCGTGTCTA810.1956332721476186No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG810.1956332721476186No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC790.19080282098347986No Hit
CATAGATCATGGGACTTCAGCATGGCACTGTTGCCAAAACAGATATATAA790.19080282098347986No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTCCTTTCCCTCACTCTCTCC750.1811419186552024No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA750.1811419186552024No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGCACTGGTACCAAAACAG740.17872669307313305No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA720.1738962419089943No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACACTCA710.17148101632692495No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT680.16423533958071684No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA670.16182011399864749No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA640.15457443725243938No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG620.14974398608830064No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC620.14974398608830064No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA590.14249830934209257No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA580.14008308376002318No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT550.1328374070138151No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCA530.12800695584967636No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG520.125591730267607No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA500.12076127910346827No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAATGAAACCCCATCTGTA500.12076127910346827No Hit
CATAGATCATGGGACTTCAGCATGGCAACATGGTGAAACCCCGTCTCTAC490.11834605352139889No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAAACAGAGTCACAATCCCCAGA480.11593082793932953No Hit
CATAGATCCCATCCAATAATAATGAGCACAAAGTCACGAAAGTGGGTCTA470.11351560235726017No Hit
CATAGATCCCATCCAATAATAATGAGCACTGACGACATGGTTCTACACAT470.11351560235726017No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATGGTGAAACCCCGTTTCTA460.1111003767751908No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC450.10868515119312144No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTGCACCTGTAGTCCCAGCTA450.10868515119312144No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCGTCTCTT450.10868515119312144No Hit
CATAGAGATGTTTGATAAGCAGGGTGACATGCACCTGTAGTCCCAGCTAC430.10385470002898271No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG430.10385470002898271No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGACTGATACAGGAAGG420.10143947444691333No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG420.10143947444691333No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG420.10143947444691333No Hit
CATAGATCATGGGACTTCAGCATGGCTAACATGGTGAAACCCCATCTCTC420.10143947444691333No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGCTTTCTAGATATACACTCA420.10143947444691333No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)