FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences143697
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC92436.432284598843399No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC81195.6500831610959175No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA74655.194958836997293No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA70684.918683062276874No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT47073.2756424977556944No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA39712.763453655956631No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA37962.641669624278865No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT35342.459341531138437No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA28191.9617667731407058No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA26871.8699068178180476No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT25821.796836398811388No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC25171.7516023299025032No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA21181.4739347376771956No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG20201.4057356799376466No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA19531.3591097935238732No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA19371.347975253484763No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC18981.3208348121394324No Hit
CATAGATCTGGGAGGTGAAGAGGACAAGCACATTATTATTGGTTGGTTCT18331.2756007432305476No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT17741.2345421268363292No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT17561.2220157692923304No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG17031.1851326054127782No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA14441.004892238529684No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT13670.9513072645914669No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA13530.9415645420572454No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT13380.9311259107705798No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13170.9165118269692478No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11990.8343945941808111No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA10710.7453182738679305No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9140.6360605997341628No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8290.5769083557763905No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT8070.5615983632226142No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG7880.5483760969261711No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA7230.5031420280172864No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7070.4920074879781763No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG7050.4906156704732875No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6710.46695477289017867No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6640.46208341162306793No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA6610.4599956853657349No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTTGGTGAAAAGTAGGGGACAGTTC6590.45860386786084606No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT6500.45234068908884667No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6260.43563887903018156No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA6180.43007160901062647No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6150.4279838827532934No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG6060.421720703981294No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5900.4105861639421839No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG5480.38135799633951994No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT5450.37927027008218683No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5230.3639602775284105No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5180.36048073376618855No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT5120.35630528125152233No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5080.3535216462417448No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT5050.35143391998441165No Hit
CATAGATGCACCAGAAGCCACCTACCAGCATGAGAAGAATGGCCTCTATG4990.34725846746974537No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC4820.33542801867819094No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4580.31872620861952583No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC4440.30898348608530446No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT4410.30689575982797135No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4360.3034162160657495No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC4210.2929775847790838No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG4190.29158576727419505No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3950.27488395721552994No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA3800.2644453259288642No Hit
CATAGACCATGTAATACCATCGTGAGCAGATACCATCGGCCGCACTGAAA3790.2637494171764198No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3760.26166169091908664No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGATGACTTATGGAATCTGA3710.2581821471568648No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3690.25679032965197607No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGGAACAAGGGCA3500.24356806335553283No Hit
CATAGATTTGGCACTCACATACACGCATAGACTGGTGGTGCTGGAACTAG3400.23660897583108903No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT3270.22756216204931212No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT3180.22129898327731268No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG3120.2171235307626464No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3110.21642762201020202No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT3100.21573171325775764No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC3030.210860351990647No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA2960.20598899072353632No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT2760.19207081567464873No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT2710.18859127191242683No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGTACAATGGGCACACTTAA2500.17397718811109486No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGAACAAGGGCATGGTCAAG2440.1698017355964286No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATTGTCCTTGCA2370.16493037432931792No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2310.16075492181465167No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2290.15936310430976292No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG2190.15240401678531912No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2150.1496203817755416No Hit
CATAGAGTCATTCCAAACTGTGCACTTCAGCCCCTTTACCTACCTTCTCA2120.14753265551820843No Hit
CATAGAATTCCCCAATGTCCTGTGCAAAAGGGCAAGTGTATGGTCAGTTC2080.14474902050843094No Hit
CATAGATCATGGGACTTCAGCATGGCCTCCAGCATGAGAAGAATGGCCTC2030.14126947674620904No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1990.13848584173643153No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA1960.1363981154790984No Hit
CATAGAATCCCTGCCCTTGACCTTGGCGACATGGTTCTCACCCGTAATCC1930.13431038922176525No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCGAACAAGGGCATGG1860.1294390279546546No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG1840.12804721044976583No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1740.12108812292532203No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAGGGCAAGTGTATGGTCAG1720.11969630542043327No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGGAACAAGGGCATGGTCAA1650.11482494415332263No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATACTGCTCTCTTCCGCCTTT1630.11343312664843386No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTACCG1580.10995358288621196No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1580.10995358288621196No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1530.10647403912399007No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA1520.1057781303715457No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA1510.10508222161910132No Hit
CATAGATCTGGGAGGTGAAGAGGACACACTGACGACATGGTTCTACACAT1470.10229858660932378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)