FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807050

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807050
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences143697
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG98326.842174854033139No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG80945.632685442284808No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT74565.188695658225294No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT72385.0369875501924195No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT46253.2185779800552554No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT44853.121150754713042No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT39452.745360028393077No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT37052.578341927806426No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT28541.986123579476259No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT27271.897743167915823No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT26521.8455500114824945No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG25651.7850059500198336No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT21471.4941160914980827No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG20691.4398352088074213No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT19321.3444957097225412No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19131.331273443426098No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT18781.3069166370905447No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT17611.2254953130545523No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT17121.1913957841847778No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG16971.180957152898112No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC14401.0021086035199065No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT13710.9540908996012444No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT13560.9436522683145786No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT13150.915120009464359No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11940.830915050418589No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG10980.7641078101839287No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT10780.7501896351350411No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA9820.6833823949003807No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8700.6054406146266101No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG7880.5483760969261711No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC7790.5421129181541716No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT7380.5135806593039521No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG7100.4940952142355094No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG7000.48713612671106565No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6880.4787852216817331No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGAACTTTCCCACCGCCCTTTTC6800.47321795166217806No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6670.46417113788040115No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG6570.4572120503559573No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT6480.4509488715839579No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6420.44677341906929163No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT6410.4460775103168472No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6100.42450433899107154No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG6060.421720703981294No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5880.40919434643729513No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT5580.38831708386396374No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG5370.3737030000626318No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC5310.3695275475479655No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5250.36535209503329924No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGGCTGCATGGTGACTTTTCTAT5190.36117664251863296No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG5130.3570011900039667No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC5090.35421755499418917No Hit
CATAGAGGCCATTCTTCTCATGCTGGTAGGTGGCTTCTGGTGCATCTATG5090.35421755499418917No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4630.3222057523817477No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4520.3145507561048595No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA4330.3013284898084163No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4280.29784894604619444No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG4210.2929775847790838No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC4110.28601849725463996No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT3980.27697168347286305No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC3880.27001259594841925No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3790.2637494171764198No Hit
CATAGACAATTTCAGTGCGGCCGATGGTATCTGCTCACGATGGTATTACA3790.2637494171764198No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3740.26026987341419794No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGGTGGCTTCTGGT3680.25609442089953166No Hit
CATAGAACTAGTTCCAGCACCACCAGTCTATGCGTGTATGTGAGTGCCAA3460.2407844283457553No Hit
CATAGACACTTGACCATGCCCTTGTTCCTTGGTCTCATAGACACTTGAAA3380.23521715832620027No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3250.22617034454442334No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT3130.21781943951509078No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG3080.21433989575286885No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3060.21294807824798015No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA3020.21016444323820263No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG2940.20459717321864757No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2840.1976380856942038No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT2790.19415854193198187No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACATAGAACTTTCCCACCGCC2510.17467309686353927No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGAACTTTCCCACCGCCCT2440.1698017355964286No Hit
CATAGATCCATGGTGTGCAAGGACAATAGATCCATGGTGTGCACAGGACA2410.16771400933909547No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2380.1656262830817623No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2270.15797128680487416No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2250.15657946929998537No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2190.15240401678531912No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCACAGGACATTGGGGAATTC2160.15031629052798598No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG2150.1496203817755416No Hit
CATAGACACTTGAAAGCTCCCTGGATCTATGTGTAGAACCATGTCGTCAG2120.14753265551820843No Hit
CATAGAGGCCATTCTTCTCATGCTGGAGGCCATGCTGAAGTCCCATGATC2090.14544492926087532No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2080.14474902050843094No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2020.14057356799376466No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCTGAAGTGCACAGTTTGGAATG2010.13987765924132028No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTCTCATAGACACTTGAAAGCT1880.13083084545954332No Hit
CATAGAAAAGGGAGGGATTACGGGTGAGAACCATGTCGCCAAGGTCAAGG1870.13013493670709897No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1850.1287431192022102No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT1840.12804721044976583No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC1830.12735130169732145No Hit
CATAGAACTGACCATACACTTGCCCTCTGTCTAGGATGAGATAATTGCCC1760.1224799404302108No Hit
CATAGACACTTGACCATGCCCTTGTTCCACATAGAACTTTCCCACCGCCC1630.11343312664843386No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGTATCCCAGTTAGGCTACTTGG1620.11273721789598948No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1580.10995358288621196No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA1570.10925767413376758No Hit
CATAGACCAGGACAATCACAGGGCACAGTTAGGCTACTTGGGGGTCTCTA1520.1057781303715457No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGTGTAGAACCATGT1490.10369040411421254No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)