FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807058

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807058
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153853
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG86815.6423989132483605No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT66364.31320806224123No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT60613.9394746933761446No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG54913.5689911798924943No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT38662.512788180925949No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT35892.3327461927944206No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT35072.2794485645388782No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT32372.10395637394136No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT29901.9434135180984449No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG28581.8576173360285466No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT26331.7113738438639483No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG26241.7055241041773643No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT23701.5404314508004395No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT18061.173847763774512No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG14490.9418080895400154No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC13930.9054097092679375No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG13200.8579618206989789No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG12750.8287131222660591No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT11480.7461667955775968No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG10920.7097684153055189No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC10620.6902692830169058No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG10620.6902692830169058No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT10480.6811696879488862No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG9810.6376216258376503No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT9410.611622782786166No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGCTCACGATGGTATTACA8970.5830240554295334No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC8870.5765243446666624No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT8780.5706746049800784No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG8760.5693746628275042No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT8300.5394759933182973No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC8010.5206268321059713No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT7360.4783787121473094No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT7200.4679791749267158No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT7050.4582296087824092No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA6930.4504299558669639No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACACTTGAAAGCTCCCTGGATC6920.4497799847906768No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC6910.4491300137143897No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT6590.4283309392732023No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCATAGATGTGGTTGCATGGGGGTC6570.4270309971206281No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT6560.4263810260443411No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC6520.42378114173919257No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6110.39713232761142125No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTTGCAGGATGAATGGGGA6080.39518241438255997No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT6020.3912825879248374No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT5980.38868270361968893No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGGTGGCTTCTGGTGCA5900.3834829350093921No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG5900.3834829350093921No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG5820.37828316639909526No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5810.37763319532280815No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA5740.3730833977887984No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC5700.37048351348364994No Hit
CATAGATGGCCCACTGACATTTTCCTTAGACAGGGGTGTGGTGTTCTGTC5640.36658368702592736No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT5450.35423423657647235No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC5420.352284323347611No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA5370.3490344679661755No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5290.3438346993558787No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC5210.3386349307455818No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCTCCCTCTCTCACACATC5170.33603504644043336No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT5140.33408513321157207No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA5130.333435162135285No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT5080.33018530675384944No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5040.32758542244870104No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC4910.31913579845696866No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT4900.3184858273806816No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT4850.315235971999246No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGACACTTGAAAGCTCCCTGG4750.308736261236375No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTGCGTGTATGTGAGTGC4720.3067863480075137No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGTCTGGTAGGTGGCTTC4660.302886521549791No Hit
CATAGATGAGGGATGTAGGCTGTACACCATAGATGTGGTTGCATGGGGGT4630.3009366083209297No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4490.2918370132529102No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT4430.2879371867951876No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA4410.2866372446426134No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4370.284037360337465No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT4230.2749377652694455No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT4230.2749377652694455No Hit
CATAGAACTGACCATACACTTGCCCTACGGTTGCAGGATGAATGGGGACA4210.2736378231168713No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4110.26713811235400026No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTACGGTTGCAGGATGAATGG4050.2632382858962776No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT4050.2632382858962776No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC3980.2586884883622679No Hit
CATAGATGGCCCACTGACATTTTCCTTCAAGTGCACAGTTTGGAATGACT3910.2541386908282582No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA3820.2482889511416742No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGCAGTTAGGCTACTTGGGG3770.24503909576023863No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGCTTTTACAAACTCAAGT3750.24373915360766446No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT3710.24113926930251603No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGTCTCATAGATGTGGTTGCATGG3630.23593950069221917No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGATGGTTCCCACCTAAACTCCTG3630.23593950069221917No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC3560.23138970315820948No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3500.22748987670048684No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT3440.22359005024276418No Hit
CATAGAACTGACCATACACTTGCCCTAGACAGGGGTGTGGTGTTCTGTCT3400.22099016593761575No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT3390.22034019486132866No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGATCTCAGAGTTAGCTTGCCTC3350.21774031055618023No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3330.21644036840360606No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTAGGTGGCTTCTGGTGCATCTATG3310.2151404262510318No Hit
CATAGACAATTTCAGTGCGGCCGATGACACTGAACGAAATTTAGGTGAGC3290.21384048409845763No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA3270.2125405419458834No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTAGGTGGCTTCTGGTGC3170.20604083118301234No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3170.20604083118301234No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3170.20604083118301234No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAGATTAGATGTGGTTGCATGGGGG3100.20149103364900264No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA3080.20019109149642839No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT3060.1988911493438542No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC3050.19824117826756713No Hit
CATAGAACATCTCCCTGTTCCTCCCATACTGGATCTCAGAGTTAGCTTGC2950.19174146750469606No Hit
CATAGAACTGACCATACACTTGCCCTTGGTCTCATAGAACTTTCCCACCG2890.1878416410469734No Hit
CATAGACGTGTGGTTGGGATGTCAGAGTGGGAGTCATTCATGATCTATGT2890.1878416410469734No Hit
CATAGAACTCTTACCCTTTTGCCAGGATTGTACCAAGGTCAAGGGCAGGG2880.18719166997068631No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTGTAAGAAAGAAAACCCACAAAA2830.18394181458925077No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2790.18134193028410237No Hit
CATAGAGGCCATTCTTCTCATGCTGGAACTCTAATGTTTGCTATTACGAG2790.18134193028410237No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2770.18004198813152816No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA2710.1761421616738055No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGGTGGCTTCTGGTGCA2650.17224233521608287No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2550.16574262445321183No Hit
CATAGAATAGCTGTGTTGAAGAACCTCACATGTACACGGCAGGACTGTCT2550.16574262445321183No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCCCTGTCCTCTTCACCTCCCA2500.16249276907177632No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2490.1618427979954892No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG2470.16054285584291497No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2460.15989288476662789No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2420.15729300046147945No Hit
CATAGAACTCTTACCCTTTTGCCAGGCACTGACGCCATGCTGAAGTCCCA2390.15534308723261814No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTACGGTTGCAGGATGAATGGGGAC2330.1514432607748955No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG2230.14494355001202447No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG2150.1397437814017276No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAGACACTTGAAAGCTCCCTGG2130.1384438392491534No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2080.1351939838677179No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAGGAGTTGACAAAC2070.1345440127914308No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2040.13259409956256946No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTTGCAGGATGAATGGGGAC2040.13259409956256946No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAGGTGGCTTCTGGTGCATCTATG2040.13259409956256946No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGGCACAATGAGGCAATCTATG2020.13129415740999525No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATGGTAGGTGGCTTCTGGTGCAT2020.13129415740999525No Hit
CATAGAGCAGACAATGGATGATCAAGTGAGCCGTTTCCCCCATACTGTCT2010.13064418633370814No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT1990.12934424418113394No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1980.12869427310484685No Hit
CATAGAACATCTCCCTGTTCCTCCCAGACACTTGAAAGCTCCCTGGATCT1970.12804430202855974No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACGGTTGCAGGATGAATGGG1950.1267443598759855No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT1910.1241444755708371No Hit
CATAGAACTGACCATACACTTGCCCTGTAGCAGCTCCTCTTCTCTTCCCT1860.12089462018940156No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT1850.12024464911311447No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT1830.11894470696054026No Hit
CATAGATGGCCCACTGACATTTTCCTACACTGAACGAAATTTAGGTGAGC1810.11764476480796604No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGTGCACAGTTTGGAATGACTCTA1760.11439490942653052No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT1740.1130949672739563No Hit
CATAGATGAGGGATGTAGGCTGTACACTAGGTAGCAGCTCCTCTTCTCTT1730.1124449961976692No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC1720.11179502512138209No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTTGCAGGATGAATGGGGAC1670.10854516973994657No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAGAGTACATGTACACGGCAG1660.10789519866365947No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGAAAGAAAACCCACAAAAGACGT1640.10659525651108527No Hit
CATAGAACCTCAAGCCGGAAAACCTTTAGATGTGGTTGCATGGGGGTCTA1630.10594528543479814No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGAGAAGGAAAACAGGGCTGCATGG1620.10529531435851106No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1600.10399537220593684No Hit
CATAGATGGCCCACTGACATTTTCCTTCAAGAAAGAAAACCCACAAAAGA1590.10334540112964972No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTAGAACCATGTCTG1590.10334540112964972No Hit
CATAGAACTAGTTCCAGCACCACCAGCTACGGTTGCAGGATGAATGGGGA1550.10074551682450132No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)