FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12925
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA11969.253384912959381No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA11558.936170212765958No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT11408.820116054158607No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG11268.711798839458414No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT5444.20889748549323No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT4753.67504835589942No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGCTTCCTTC3412.6382978723404253No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGTCATAGACCACCTGATTGGC2732.112185686653772No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2401.8568665377176015No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2251.7408123791102514No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA2151.6634429400386848No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATAATAAATGGGGGCAAGGAA1871.446808510638298No Hit
CATAGACCTTTGGGTTCATATCATCTGGATCCTTTCCCTCACTCTCTCCA1621.253384912959381No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1611.2456479690522242No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTATGTGCTTCTTTCAAAAG1581.2224371373307543No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACACATACTCAGGAGGCTGAGG1481.1450676982591876No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1371.0599613152804643No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCACCT1361.0522243713733075No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1301.0058027079303675No Hit
CATAGATCCTCTCATTGTCCAGTTTGGGAATCCTTTCCCTCACTCTCTCC1280.990328820116054No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1160.897485493230174No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1150.8897485493230174No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT1100.851063829787234No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACAAGCAATGGGGAAAGGATT1090.8433268858800774No Hit
CATAGATCCCATCCAATAATAATGAGCATGTCTATGAGACCAAGTCTCAC1000.7736943907156674No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCTAACCATGGGCATATCTA1000.7736943907156674No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCCTTTTTGTGTGCTTCTTTCAA810.6266924564796905No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA760.5880077369439072No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG750.5802707930367506No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTCATAGAATCCTTTCCCTCACT660.5106382978723404No Hit
CATAGACACCATGCCTGGCTAATTTTCATAGAAAGGCCTTCCTAACCATG650.5029013539651838No Hit
CATAGATCCCATCCAATAATAATGAGCATGTCCATACGTGAATGTGGATC640.495164410058027No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG630.4874274661508704No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC610.47195357833655704No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACGGTAGCAGAATTACCTCTGG590.45647969052224374No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC590.45647969052224374No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA540.4177949709864603No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT500.3868471953578337No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA480.3713733075435203No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA390.30174081237911027No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA380.2940038684719536No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCAAGTCTCT370.2862669245647969No Hit
CATAGATCCCATCCAATAATAATGAGCAACAATGGGCAAGCAATGACAGT360.27852998065764023No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA350.27079303675048355No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA340.26305609284332687No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG340.26305609284332687No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTACCTGATTGGC340.26305609284332687No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG340.26305609284332687No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCACCTG320.2475822050290135No Hit
CATAGAGATGTTTGATAAGCAGGGTGAACACTGACGACATGGTTCTACAC310.23984526112185686No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACGACATGGTTCTACACA290.2243713733075435No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA270.20889748549323015No Hit
CATAGAGGATCCCATCTGAGTTGGTCACACTGACGACATGGTTCTACGCA240.18568665377176016No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGATGGCTACACATGGCTATGCA240.18568665377176016No Hit
CATAGATGCCCTTTTTGTGTACTTCCATACACTGACGACATGGTTCTACA220.1702127659574468No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAAGCAATGGGGAAAGGATTC220.1702127659574468No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTATCCCCAGA220.1702127659574468No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAATGATCTATCCAGGAAT200.15473887814313345No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA200.15473887814313345No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT190.1470019342359768No Hit
CATAGATCCTCTCATTGTCCAGTTTGGACACTGACTGATACAGGAAGGCC180.13926499032882012No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATAGATGCCCTTTTTGTGTACT180.13926499032882012No Hit
CATAGACCTGGGCTTAGGGGCTATACAATCTATACGTGAATGTGGATCAG180.13926499032882012No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC170.13152804642166344No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCTACACATGGCTATGCAATCTAT170.13152804642166344No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGACGACATGGTTCTACA170.13152804642166344No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC160.12379110251450676No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAATCACCTGATTGGCCA160.12379110251450676No Hit
CATAGATGTATACAAGCTGTCACAGACAACAATGGGCAAGCAATGACAGT150.11605415860735009No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTTCTGTTATTCAAAGGTTTTC150.11605415860735009No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGACC150.11605415860735009No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA150.11605415860735009No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA150.11605415860735009No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAATAATGAACAAGCAATGGGGAA130.10058027079303675No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC130.10058027079303675No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)