FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12925
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA11488.882011605415862No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA11308.742746615087041No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA11188.64990328820116No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT10828.37137330754352No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT5274.077369439071567No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT4823.7292069632495166No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG4683.6208897485493234No Hit
CATAGAATAGCCAGCAGAAGGAAGCATGTCGTCAGTGTACTGGGGACTGT3302.553191489361702No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTCTATGACAACCCCTTAAGAAA2722.104448742746615No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG2381.8413926499032882No Hit
CATAGACTTCCTTGCCCCCATTTATTATTGGAACTTTGCCCCAAAAGAGG1791.3849129593810445No Hit
CATAGACCAGACTTTTGAAAGAAGCACATACGGAGCAGGAATTAGACTCT1621.253384912959381No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT1601.2379110251450676No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATCCAGATGATATGAACCCAAAGG1591.230174081237911No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTACATCACTTATACGCCTCC1451.1218568665377175No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA1331.0290135396518376No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCCCAAACTGGACAATGAGAGG1301.0058027079303675No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT1280.990328820116054No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1130.8742746615087041No Hit
CATAGAATCCTTTCCCCATTGCTTGTGAGCAGGAATTAGACTCTTGACAT1100.851063829787234No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA1030.7969052224371374No Hit
CATAGAATCCTTTCCCCATTGCTTGTGAGACTTGGTCTCATAGACATGCT940.7272727272727273No Hit
CATAGATATGCCCATGGTTAGGAAGGTTGGAAGTTAGGAAGCCAGCTCTA900.6963249516441006No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG810.6266924564796905No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGTGGAAGTACACAA800.6189555125725338No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT780.6034816247582205No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG750.5802707930367506No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA650.5029013539651838No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTATGGAAGTACACAAAAAG630.4874274661508704No Hit
CATAGATATGCCCATGGTTAGGAAGGCCTTTCTATGAAAATTAGCCAGGC630.4874274661508704No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGCCAAACTGGACAAT610.47195357833655704No Hit
CATAGAAGTTCTGATCCACATTCACGTATGGACATGCTCATTATTATTGG600.46421663442940037No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTACTGGGGACTGTGACTCTG590.45647969052224374No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA500.3868471953578337No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGAAGTTAGGAAGCCAGCT460.35589941972920697No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA450.3481624758220503No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGATGGGATCTATGTGTAG450.3481624758220503No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA390.30174081237911027No Hit
CATAGAGTTCAAATGGCCAATCAGGTACACATAGATTGGAACTTTGCCCC380.2940038684719536No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA370.2862669245647969No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGCTCATTATTATTGGATGGGAT360.27852998065764023No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG350.27079303675048355No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG340.26305609284332687No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT340.26305609284332687No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTACAAATCTATGTGTAGAACC330.2553191489361702No Hit
CATAGAGTTCAAATGGCCAATCAGGTGAGACTTGGTCTCATAGAGCAGGA320.2475822050290135No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGTAGCAGAGACTTGGTCTCATAA320.2475822050290135No Hit
CATAGATGAAAAGTCAAGCCAGCACAGATGGGATCCTCTATGTGTAGAAC310.23984526112185686No Hit
CATAGATGAAAAGTCAAGCCAGCACAGATGGGATCCTCTATGCGTAGAAC270.20889748549323015No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTGGAAGTTAGGAAGCCAGC270.20889748549323015No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG250.19342359767891684No Hit
CATAGACTGTCATTGCTTGCCCATTGAGACTTGGTCTCATAGACTGTCAT240.18568665377176016No Hit
CATAGAATCCTTTCCCCATTGCTTGTGACAGCTTCCACATGATGGACATC220.1702127659574468No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGGAA220.1702127659574468No Hit
CATAGATTGCATAGCCATGTGTAGCCATCACTGGGGACTGTGACTCTGTT220.1702127659574468No Hit
CATAGACATGCTAACATTTCTGGGGATACATGCTAACATTACTGGGGACT210.16247582205029013No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGATTGTATAGCCCCTAAGCC200.15473887814313345No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCATTGGTCTCATAAATTCA180.13926499032882012No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCCAAACTGGACAATGAGAG180.13926499032882012No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT180.13926499032882012No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT170.13152804642166344No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTTGCT160.12379110251450676No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGTCTGTGACAGCTTGTATACAT150.11605415860735009No Hit
CATAGAGTTCAAATGGCCAATCAGGTGATTTGGTCTCATAAATTCAACAG150.11605415860735009No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAAGAGCAGGAATTAGACTCTTG150.11605415860735009No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTGTCATTGCTTGCTCATTATT150.11605415860735009No Hit
CATAGAATAGCCAGCTTCCACATGATGGACATCTATGTGTAGAACCATGT130.10058027079303675No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGCAGGAATTAGACTCTTGACA130.10058027079303675No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)