FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807065

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807065
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48071
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2065242.96145285099124No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA20074.175074369162281No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC10442.171787564227913No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT6941.4436978635767925No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT6881.431216325851345No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC6331.3168022300347404No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA5681.1815855713423893No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC5561.156622495891494No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT5321.1066963449897027No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG4730.9839612240227996No Hit
CATAGACCTTCCTGTTGGCCACACAGGAGGATCACTTGAGCACAGGAATT4190.8716273844937696No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA4010.8341827713174262No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG3630.7551330323895904No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG3520.7322502132262695No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3100.644879449148135No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT2660.5533481724948514No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC2500.5200640718936573No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2470.5138233030309334No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA2450.5096627904557841No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT2360.4909404838676125No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACACTTCAGTTGACTATA2300.4784589461421647No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA2250.46805766470429155No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2190.4555761269788438No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC1980.4118907449397766No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA1860.386927669488881No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1740.3619645940379855No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1720.35780408146283627No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1580.3286804934367914No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG1500.3120384431361944No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1410.29331613654802274No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGAGGTTGCAGC1370.2849951113977242No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCCCTTGTGCTCATACAGAATTAGA1350.28083459882257494No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1310.27251357367227647No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1280.26627280480955257No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT1270.26419254852197793No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1260.2621122922344033No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1210.25171101079653013No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGATCTGAGCAAGGATA1190.2475504982213809No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1140.23714921678350773No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1120.23298870420835846No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1010.21010588504503752No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGGCTGCTTTTCTCT1010.21010588504503752No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACCACTTCAGTTGACTATAA1000.2080256287574629No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTAGAGGCCTGAGAT950.19762434731958978No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGCAACAGAACAACAACAT950.19762434731958978No Hit
CATAGACTTGATGCCCAGGAAACCTCTAAAAAGATGCTCTTCCTCATTCG930.1934638347444405No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG880.18306255330656737No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG850.1768217844438435No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC820.1705810155811196No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG810.16850075929354497No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA800.16642050300597033No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGCCCTAGGCAGTCTCAAAC800.16642050300597033No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG730.15185870899294793No Hit
CATAGATCTGTGGCTCCCGATAAATGTGATCTGAGCAAGGATAGCCCTCT730.15185870899294793No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG720.1497784527053733No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC700.14561794013022406No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG690.14353768384264942No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCACTCAGACATGTTTCCTA690.14353768384264942No Hit
CATAGACAGCTCACAGACTGCATACTTCAGTTGACTATAAGAAACACCTC670.13937717126750016No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTGTAGGCCGCTAAGCCGAG670.13937717126750016No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG670.13937717126750016No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGTGGAGGCTGC660.13729691497992552No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGAGACAGCCG640.13313640240477628No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG610.12689563354205238No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA610.12689563354205238No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG600.12481537725447776No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC600.12481537725447776No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTAGAGAATTAGCGGAGAGTG590.12273512096690313No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT590.12273512096690313No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA580.1206548646793285No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC580.1206548646793285No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT580.1206548646793285No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA570.11857460839175386No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTACTGCACTTTAGCTTGGG560.11649435210417923No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC550.11441409581660461No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCTACCGTAAGCTTGGGTGAC550.11441409581660461No Hit
CATAGAATGCAGGAGAATATACACAGGTTGTAGTGAACCGAGATCAAGCC550.11441409581660461No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA540.11233383952902998No Hit
CATAGAGAAGAGAAGGCGACAATGGCATGAACTTGGGAGGCGGAGCTTGT520.10817332695388071No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA510.10609307066630608No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT510.10609307066630608No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCACACCGGTAATTCCAGCTACTT500.10401281437873144No Hit
CATAGATTCTCCCTTGTGCTTTTGGTGTTACAACCAATGCTCTTTCATCT500.10401281437873144No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG490.10193255809115684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)