FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807067

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807067
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86190
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2852733.097807170205364No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG50295.834783617589047No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG33853.927369764473837No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT16191.8784081680009284No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA12851.4908922148741153No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT11231.3029353753335653No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA9531.105696716556445No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT8941.0372432996867387No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG8140.944425107321035No Hit
CATAGATGAAAGACAAGCAGGGAAGCACACTGCCATCACAGTTCATTGTA7380.8562478245736164No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT6330.7344239470936303No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGTGGTATATTTTCTAAA6260.7263023552616312No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT6140.7123796264067758No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTAGTTGCAATATAGATGAAATGC5910.685694396101636No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC5860.6798932590787794No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATTGGCTGTCATGAT5830.6764125768650655No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGTATATTTTCTAAAGCCTGGGA5340.6195614340410721No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGATGAGGGTATAAGGTCTA5210.6044784777816452No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT5020.5824341570947905No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC4840.5615500638125073No Hit
CATAGATCCACAAAGACCAAGAGTGTCAGTGTTGATGAGGGTATAAGGTC4650.5395057431256526No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG4550.5279034690799397No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA4500.5221023320570832No Hit
CATAGAGCTATCTGGCAAAAACCCATCCAGTAGCAAGATAGGACAGAATT4380.5081796032022277No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTGGAGGATGATCAATGC4350.5046989209885138No Hit
CATAGACACATGTAGGATGGGGTGGCACACTGCCATCACAGTTCATTGTA4280.49657732915651465No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGTTGGCCAGGCCCTAGTATACC4110.4768534632788026No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA3930.4559693699965194No Hit
CATAGACACATGTAGGATGGGGTGGCCCTGGCTGGGCTGTGGCTCTGCCA3610.41884209305023784No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG3540.4107205012182388No Hit
CATAGACACATGTAGGATGGGGTGGCTACGGTGGGCATTGCTCTTGACAT3460.40143868198166843No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTAGAGGTCAAGGTGGG3440.3991182271725258No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTATGGAGGATGATCAATG3240.3759136790810999No Hit
CATAGAGCATTACCCTCAAACTATCCCTATACGGTTCCATGTGTGTGCGA3090.3585102680125305No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT3060.35502958579881655No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGCCATCACAGTTCATTGTAT3030.35154890358510266No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT2940.34110685694396103No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT2930.3399466295393897No Hit
CATAGATCCACAAAGACCAAGAGTGTCTGCTACCGTACAGACAGGATGCG2900.3364659473256758No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGGAGACAGCCGCTCACC2740.3179023088525351No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTACCGTATGGAGACAGCCGCTCAC2710.3144216266388212No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT2570.2981784429748231No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2550.2958579881656805No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT2400.2784545770971111No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC2280.2645318482422555No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2280.2645318482422555No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2250.2610511660285416No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTCGTTTGCTTTGTCAAAGA2240.2598909386239703No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACATGGAGGATGATCAAT2150.24944889198282866No Hit
CATAGACTTCAGCCCTCACAAGCCTTACTTGGTCTCTGACTGTGTTAATT2120.24596820976911477No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1940.22508411648683144No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTGGCTGTCATGATTATCACC1930.22392388908226013No Hit
CATAGAGGTGTCCTTTCCCCACTTTAACACTGAGGTCAAGGTGGGAGGAT1880.21812275205940365No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGCCATCACAGTTCATTGTA1830.21232161503654717No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGTGTCTATGTGCCATGA1800.20884093282283328No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG1660.19259774915883512No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA1650.19143752175426382No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1630.18911706694512126No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACGACATGGTATAT1620.18795683954054995No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1570.18215570251769347No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAACTACAAAAAAATT1560.18099547511312217No Hit
CATAGATGAAAGACAAGCAGGGAAGCGGCCAGCGGTCTGTTCGGCCACTC1540.17867502030397958No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1440.16707274625826662No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGAGGTCAAGGTGGGAGGATG1440.16707274625826662No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1420.16475229144912404No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1420.16475229144912404No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1350.15663069961712495No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1320.15315001740341108No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1320.15315001740341108No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1270.14734888038055458No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1260.1461886529759833No Hit
CATAGACACATGTAGGATGGGGTGGCAGCGCCTTTGCTCATTCCAGACCC1250.14502842557141202No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1200.13922728854855554No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCACTAACCACCTATCTACCCCCGG1200.13922728854855554No Hit
CATAGATCCACAAAGACCAAGAGTGTCAGTGTTGCCATGATTGTAAGTTT1190.13806706114398423No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTATCTCTGACTGTGTT1190.13806706114398423No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1160.13458637893027034No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1130.13110569671655645No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT1120.12994546931198514No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGA1120.12994546931198514No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1100.12762501450284255No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1080.12530455969369997No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1070.12414433228912866No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1060.12298410488455738No Hit
CATAGACACATGTAGGATGGGGTGGCTTGGCCGGACGCCTCGCTTGGCTG1040.12066365007541478No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1020.1183431952662722No Hit
CATAGACTTCAGCCCTCACAAGCCTTGAGCCCAGTTTGGAGAACTGCCAG1010.1171829678617009No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1010.1171829678617009No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG990.1148625130525583No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT990.1148625130525583No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT960.1113818308388444No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCCGTAATCCCAGCACTTT950.11022160343427312No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC940.10906137602970183No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC920.10674092122055924No Hit
CATAGAGCATTACCCTCAAACTATCCCTACTTGGTATATTTTCTAAAGCC920.10674092122055924No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAATACAAAAATTAG900.10442046641141664No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC890.10326023900684533No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC880.10210001160227404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)