FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences188377
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC94675.02556044527729No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA83914.454365448011169No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71013.769568471734872No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC62563.3209999097554372No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT53872.859690938915048No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA52512.7874952887029734No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA48792.5900189513581804No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA41502.203029032206692No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA36261.9248634387425216No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG32471.723671148813284No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA27151.4412587523954623No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT26791.4221481391040307No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT26441.4035683761818056No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA25561.3568535436916396No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA24701.3112004119398866No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG21111.1206251293947775No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20491.0877124065039787No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT17220.9141243357734755No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC16550.8785573610366446No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16380.8695329047601353No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG16000.8493605907302908No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT15850.8413978351921944No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC15780.8376818826077495No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT15740.8355584811309236No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT15190.80636171082457No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG14840.7877819479023447No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC14220.754869225011546No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA13390.7108086443674121No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA12940.6869203777531226No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA12330.6545385052315303No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12270.6513534030162917No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC11530.6120704756950158No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT10900.5786269024350106No Hit
CATAGAGCACCCAACTATCCTTCAGCAGTCACTCAAATATAGACCTCAAC10820.5743800994813592No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC10510.5579237380359597No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG10320.5478375810210376No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT10270.5451833291750054No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10220.5425290773289733No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT10080.5350971721600832No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10010.5313812195756382No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG9660.5128014566534131No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT9580.5085546536997616No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9310.494221693731188No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC9150.4857280878238851No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA8960.4756419308089629No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT8660.45971641973276994No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG8660.45971641973276994No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8270.4390132553337191No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG8110.4305196494264162No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT8100.4299887990572097No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT7810.4145941383502232No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA7710.40928563465815887No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT7690.40822393391974604No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA7660.4066313828121267No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT7570.40185372948926884No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA7500.3981377769048239No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT7260.3853973680438695No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCACAGCCCAGTTTTCCTTCTCTA7060.3747803606597408No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA6830.3625708021679929No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTACAAACCAAACAATAGCCAGTC6540.3471761414610064No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT6460.34292933850735496No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6260.3323123311232263No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG5990.31797937115465263No Hit
CATAGATCTGGGAGGTGAAGAGGACATCGGCCGCACTGAAATTGTCTATG5940.31532511930862045No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5670.3009921593400468No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACAATGGGCACACTTAACAC5640.2993996082324275No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA5330.28294324678702815No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT5250.27869644383337666No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5250.27869644383337666No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAAGGAAAATGTCAGTGGGCCA5090.2702028379260738No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5000.2654251846032159No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4910.260647531280358No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGTCACTCAAATATAGACCTCAA4850.2574624290651194No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4740.2516230750038487No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA4720.2505613742654358No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGATCTAGCTTCGGAATGTTT4720.2505613742654358No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCTTTTGCCAAGATTGTAGGAG4630.24578372094257792No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4570.24259861872733932No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACGACATGGTTGCACCCG4510.23941351651210074No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4430.2351667135584493No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4340.23038906023559141No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT4330.22985820986638497No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAAGGGCAAGTGTATGGTCAGT4190.22242630469749494No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC4100.21764865137463701No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG4080.21658695063622416No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4070.21605610026701774No Hit
CATAGATGTGTGAGAGAGGGAGAGACAATGGGCACACTTAACACCTCTAT4070.21605610026701774No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGATGACTTATGGAATCTGAA4020.21340184842098558No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA3990.21180929731336628No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGAGGGCAAGTGTA3900.2070316439905084No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3870.2054390928828891No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG3820.20278484103685696No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAGCATGAGAAGAATGGCCT3820.20278484103685696No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCCATAGAAGGGCAAGTGTATG3790.20119228992923766No Hit
CATAGAAAAGTCACCATGCAGCCCTGTCCCCTTCATTTTGCTGGAACTCT3770.2001305891908248No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACTGGTGAAAAGTAGGGG3690.1958837862371733No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT3620.1921678336527283No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT3620.1921678336527283No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3580.19004443217590258No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT3570.18951358180669614No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC3500.18579762922225113No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3490.1852667788530447No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTGTACAGCCTACATCCCT3450.18314337737621897No Hit
CATAGAACCCTGCTTCCTAAATCAACATAGATCTGGGAGGAACAGGGAGA3440.18261252700701253No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGCCAAGATTGTAGGAGTAGA3410.18101997589939323No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC3410.18101997589939323No Hit
CATAGAACTTGTGCTTTTGGTGTCACAGAACTTGTCCTTGCACACCATGG3390.17995827516098037No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGACCCCCAAGTATATGACACATT3370.1788965744225675No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT3360.17836572405336107No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG3310.1757114722073289No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAAATGTCAGTGGGCCATCT3310.1757114722073289No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCCCTTTACCTACCTTCTC3130.16615616556161314No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3100.16456361445399387No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT2990.1587242603927231No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2880.15288490633145235No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGAAGGAAAATGTCAGTGGGCC2730.14492215079335588No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT2660.14120619820891087No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTTAGGAGT2650.14067534783970442No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTTAGG2560.13589769451684655No Hit
CATAGATGCACCAGAAGCCACCTACCTGGGCCCATAATACACTTTTCTAT2520.1337742930400208No Hit
CATAGAATTCCCCAATGTCCTGTGCACTGGCTCTCTTCCGCCTTTATCCT2520.1337742930400208No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG2490.1321817419324015No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCTGGCAAAAGGGTAAG2370.12581153750192434No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAATTAGAGCCAGTTCT2340.12421898639430505No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2260.11997218344065358No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG2170.11519453011779571No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATCCATCAGAGCATCACC2160.11466367974858925No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2130.11307112864096998No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA2130.11307112864096998No Hit
CATAGAAGGGCAATTATCTCATCCTAGACATAGAAGGGCAAGTGTATGGT2100.11147857753335066No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGTGCCCTGTGATTGTCC2100.11147857753335066No Hit
CATAGAATTCCCCAATGTCCTGTACAAACCAAACAATAGCCAGTCTATGA2070.10988602642573138No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2040.10829347531811208No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1960.10404667236446064No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC1930.10245412125684134No Hit
CCCGTAATCCCTCCCTTTTCTATGAGACCAAGTCTCTGCTACCGTAGCTG1910.10139242051842848No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGAATTAGAGCCAGTTCTGA1900.10086157014922205No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAAGGGCAAGTGTATGGTC1890.10033071978001559No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)