FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences161126
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA2019312.532428037684792No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC134188.327644203914948No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC110936.884674105979172No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC87315.4187406129364595No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG56363.497883643856361No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA41282.561970135173715No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG33762.095254645432767No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA33522.0803594702282684No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT29211.8128669488474858No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA29051.802936832044487No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG26561.6483993892978166No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT25151.560890234971389No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT24791.5385474721646415No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA22681.4075940568250935No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC21541.3368419746037263No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT20771.2890532874892942No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC20531.2741581122847958No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG17641.0947953775306283No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC16461.0215607661085113No Hit
CATAGACAGGAGGAGGAAGAAGAGGACACTGACGACATGGTTCTACACAT15720.9756339758946415No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT12630.7838585951367253No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTATGGGCAACAGAACAACA12550.7788935367352259No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT12360.7671015230316647No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT10360.6429750629941785No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC10340.6417337983938036No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC9690.6013926988816206No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGACGACATGACTCTTCACT9560.5933244789791841No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA8870.5505008502662513No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGACATGGATGAAGC8620.5349850427615654No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA8460.5250549259585666No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC8410.5219517644576294No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT8340.5176073383563174No Hit
CATAGACTTGATGCCCAGGAAACCTCTCTATGAGACACTTCAGTTGACTA8290.5145041768553803No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA7860.48781698794732076No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTCAGACATGTTTCCTAGTT7600.47168054814244753No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC6730.417685538026141No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT6620.41085858272407927No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGGAGACAGCCGCTCACCT6580.40837605352332956No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA5490.34072713280289957No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA5470.33948586820252474No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT5390.3345208098010253No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT5190.3221081637972767No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTGG5100.3165224730955898No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTGGGTG5030.31217804699427776No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT4880.3028685624914663No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA4820.29914476869034173No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT4410.27369884438265707No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCCATGAGACC3440.21349751126447625No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT3380.20977371746335166No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATAGAACCCAAAGAGTGAGCCCT3330.20667055596241451No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACGTCCGCAGTTGTTCTTTCC3200.1986023360599779No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTTTATGAGAC3140.19487854225885332No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG3060.18991348385735388No Hit
CATAGATCATGGGACTTCAGCATGGCGGGTGCCTGATTGTTCTATGAGAC3030.18805158695679158No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGAAGAAGAGGCCTGAGATTGCTG2900.17998336705435497No Hit
CATAGAGAATTTGCACACCACGGGACTCTTCACTATGTCATCTTACCATC2750.1706738825515435No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGTTCTACACATAGAACCCAAAG2720.1688119856509812No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA2690.16695008875041892No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC2610.16198503034891948No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACATAGAACCCAAAGAGTGAGCC2540.15764060424760745No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG2520.1563993396472326No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA2520.1563993396472326No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG2470.15329617814629545No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACCCAAAGAGTGAGCCCTTGTCCC2450.1520549135459206No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT2440.15143428124573316No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTAGAACCCAAAGAGTGAGCCCTTG2430.15081364894554572No Hit
CATAGAGAATTTGCACACCACGGGACTTCAGTTGACTATAAGAAACACCT2400.14895175204498343No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCAGTCTCAAACGTTGTG2290.1421247967429217No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGAACCCAAAGAGTGAGCCCTTGTC2230.1384010029417971No Hit
CATAGACCCTTAGAGTTTCAGCCTCAGACATGTTTCCTAGTTTCAGTTCT2210.13715973834142225No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG2160.13405657684048508No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCCATGAGACC2120.13157404763973535No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA2080.12909151843898564No Hit
CATAAGAGCTGCTTTTCTCTTCTTGGCATCTATGAGACCAAGTCTCTGCT2050.12722962153842335No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG2030.1259883569380485No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGACGACATGGTTC2010.12474709233767363No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGACATGGATGAAGCTGGAT1940.1204026662363616No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG1920.11916140163598674No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTGCTTTTCTCTTCTTGGCATCTAT1880.11667887243523702No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTTCTAC1800.11171381403373758No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGAGACCAAGTCTCTGCTAC1790.11109318173355015No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGA1680.10426622643148839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)