FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807080

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807080
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21493
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA903342.027636905038854No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA9634.480528544177174No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8463.936165263108919No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG6523.033545805611129No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG4802.233285255664635No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT3081.433024705718141No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC2321.0794212069045734No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG1930.897966779881822No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT1780.8281766156423022No Hit
CTTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1750.8142185827943982No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG1710.7956078723305263No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1440.6699855766993905No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT1240.5769320243800307No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA1020.474573116828735No Hit
CATAGATGTGAGCACTACTGATAATCCCTAGCAGAGACTTGGTCTCATAG980.45596240636486296No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTAGACTTGGTCTCATAGAT900.4187409854371191No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT800.3722142092774392No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG780.36290885404550316No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG700.3256874331177593No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG680.3163820778858233No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC650.3024240450379193No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC610.28381333457404734No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTAGCAAAGCTGCTAT600.2791606569580794No Hit
CGTAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA580.26985530172614336No Hit
CATAGACCAAACACAGAAGACATGGCAGTCACACTGCAAGGCCTTGGATG570.2652026241101754No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG550.25589726887823944No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA520.24193923603033546No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT510.2372865584143675No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG500.23263388079839947No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA490.22798120318243148No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA480.22332852556646351No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTATGTGTAGAACCATGTCGTCAGT480.22332852556646351No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC470.21867584795049552No Hit
CGTAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG470.21867584795049552No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT470.21867584795049552No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG420.19541245987065556No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAAAGTGCTGGG410.19075978225468757No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC410.19075978225468757No Hit
CGTAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG400.1861071046387196No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA400.1861071046387196No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA390.18145442702275158No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA380.17680174940678361No Hit
CATAGACTTACTGCCCTCACTCCGTCACTTGGCCTCAGTTTCCCCTCCTT380.17680174940678361No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC380.17680174940678361No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA370.17214907179081562No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA370.17214907179081562No Hit
CATAGACCAAACACAGAAGACATGGCAGGCTTTCTGGGTAGCTGCGACCT370.17214907179081562No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA360.16749639417484763No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA360.16749639417484763No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT340.15819103894291164No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGTCGTCAGTGTGG330.15353836132694365No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA330.15353836132694365No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG320.14888568371097566No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA320.14888568371097566No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG310.14423300609500767No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG310.14423300609500767No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG310.14423300609500767No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA310.14423300609500767No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA310.14423300609500767No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA300.1395803284790397No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG300.1395803284790397No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCTTGGCCTCAGTTTCCCCTC290.13492765086307168No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA290.13492765086307168No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG280.13027497324710371No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCAGTGGGGCGAAAGTGAT280.13027497324710371No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA270.12562229563113572No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA270.12562229563113572No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT270.12562229563113572No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG270.12562229563113572No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACCATGTCGTCAGTGTACCTCTC270.12562229563113572No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCTGCCTCCCAAAGTGCTGGG260.12096961801516773No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCCATCAATTTAAGGTAGGCAC260.12096961801516773No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC260.12096961801516773No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGAAGTCCCATGATCTATG250.11631694039919974No Hit
CATAGACCAAACACAGAAGACATGGCATAACCTGCTTCTGCCACCAACCA250.11631694039919974No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT240.11166426278323176No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT240.11166426278323176No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC230.10701158516726375No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA230.10701158516726375No Hit
CGTAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC230.10701158516726375No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC220.10235890755129577No Hit
CATAGATGATGTGAAAAGGACCCATGGCTTGAGAGAAAACTACCCCAGGC220.10235890755129577No Hit
CGTAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT220.10235890755129577No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)