FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807081

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807081
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78534
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1111914.158198996612931No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG67428.58481676726004No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG56567.201976214123819No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG53406.799602719841088No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT27003.43800137520055No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG25313.222807955789849No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA24463.114574579163165No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC22612.8790078182697942No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA20922.6638143988590928No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC15922.0271474775256575No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12821.632413986298928No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA12591.6031273079175896No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA11441.4566939160108998No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA11331.4426872437415643No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA11251.4325005730002291No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG11141.4184939007308937No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT10571.3459138716988819No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT9931.2644205057682023No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC8161.0390404156161663No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT7891.0046604018641607No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7660.9753737234828227No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT7020.8938803575521429No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG6530.8314869992614663No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT6370.8111136577787965No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTGTTTCCCCACTCAAATACCA3910.49787353248274635No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA3580.45585351567473964No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT2980.3794534851147274No Hit
CATAGACCCAAGACCCCAGCCTTTACGACACTGACGATCATTGTTCACTG2970.3781801512720605No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG2440.3106934576107164No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2390.30432678839738203No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2300.29286678381338016No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2290.2915934499707133No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG2290.2915934499707133No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2160.275040110016044No Hit
CATAGAAGGACAAAGACATTTAGGACCCCTGCAGTCTTTGGAGGAATCTA2050.2610334377467084No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT2040.2597601039040416No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA1840.23429342705070413No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGACGATCATTGT1770.22538009015203608No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA1760.22410675630936916No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGACATGGTTCTAC1720.21901342093870171No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1600.20373341482669924No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA1570.19991341329869866No Hit
CATAGAGTCTGAATGGTGGGAGAGTGACACTGTCATTGTCGCTGTCCCAT1560.1986400794560318No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1510.19227341024269745No Hit
CATAGAGCTTTTTCTCCAGCCTCCAACACTGACGCTATACCACACTACAC1510.19227341024269745No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT1510.19227341024269745No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTATGTGTAGGACATGC1490.1897267425573637No Hit
CATAGACGGATTATTCTCTCCATGGTCTGGAGACAGCCGCTCACCTCTAT1480.18845340871469682No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAGTGTCTG1450.1846334071866962No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA1400.17826673797336187No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA1380.1757200702880281No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGAGATCCCACCATTTG1380.1757200702880281No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1340.17062673491736063No Hit
CATAGATCATGGGACTTCAGCATGGCATCTACAAAGGATTCTGGGCCATC1280.16298673186135942No Hit
CATAGACTCATTGCACTTTCCACAACTGTCACGCTATACCACACTACACA1270.16171339801869253No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATGGTTCTACACATAGAAATGAT1250.1591667303333588No Hit
CATAGACAGTGCCTTTGTGCGTGTTAACACTGACGACATGGTCTACCAGT1210.15407339496269132No Hit
CATAGAGCTTGGGTGCGAACATCAACAAAACTCGTGACTGGAGACAGCCG1180.1502533934346907No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA1160.14770672574935698No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1150.14643339190669008No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT1140.1451600580640232No Hit
CATAGACATTTAATCCTCACAATGACCCATTACACATAGAGTGTCTGTTT1130.14388672422135637No Hit
CATAGACACAACAGAGAGAACGGGCTCACTGAGACATGGTTCTACACATA1100.14006672269335574No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1080.137520055008022No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGACGACATGGTTCTACACA1060.13497338732268827No Hit
CATAGAGAAGACTCCCTCAACCCACCCACTGTCATTGTCGCTGTCCCATC1050.1337000534800214No Hit
CATAGATCAAGGAAAACACCAGCCCACACCTTCCCCACACCCTCTTCTTC1030.13115338579468763No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1000.12733338426668706No Hit
CATAGAAAAAACAGTTGGCCAGGCATGTCTTTATTAGCTCTATGAGACTG990.12606005042402016No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC960.12224004889601957No Hit
CATAGACCTCCGACAGTTTTTATGCACAAATGAGAAACCTGGATGCTTCT950.12096671505335269No Hit
CATAGAGCTTGGGTGCGAACATCAACAAAACTGGTGGAAGGGTAAGAGAG940.11969338121068582No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT910.1158733796826852No Hit
CATAGAGAAGACTCCCTCAACCCACCCCAACATTGCTTCTTGTGGTAACT890.11332671199735148No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGCTCAGGTAT890.11332671199735148No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTAATCTGAAATCTTCGTGT880.11205337815468458No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT860.10950671046935086No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT840.1069600427840171No Hit
CATAGAGTCCAACTATTCCAGCACCAGGCTAATCTGAAATCTTCGTGTTC810.10314004125601652No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT800.10186670741334962No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATTTTGTCATGCCCTACTTCCT790.10059337357068276No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA790.10059337357068276No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT790.10059337357068276No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)