FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95771
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT76357.972141880109845No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA62476.522851385074814No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA46784.884568397531612No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG46264.830272211838657No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA40014.177673826106024No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA38594.029403472867569No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG33583.5062806068642907No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT24052.5111985882991723No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG23352.438107569097117No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA20532.143655177454553No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA15721.6414154597947186No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA15111.5777218573472136No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14421.505674995562331No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT14381.5014983658936423No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACATAGAACAGCTAA12471.3020642992137494No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT12121.265518789612722No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG9941.0378924726691796No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9560.9982144908166355No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCTAGAACAGCTAAAAAT8310.8676948136701088No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7830.8175752576458427No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7410.7737206461246098No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC7360.7684998590387486No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG6380.6661724321558717No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6040.6306710799720167No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5760.6014346722911946No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT5560.5805515239477503No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5350.5586242181871339No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG5330.5565359033527895No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT5330.5565359033527895No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC5020.5241670234204509No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG4670.4876215138194234No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA4630.48344488415073456No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAATTTGCAAATACAGAATCAG4580.4782240970648735No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT4580.4782240970648735No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACCCTAGAATTTGCAAA4320.45107600421839594No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTCAGTGTTAGAACATTAGCT4190.4375019577951572No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4040.421839596537574No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGACCAAAGCTAGAA3860.40304476302847414No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA3790.39573566110826863No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACCGTAGAACATTAGCTT3790.39573566110826863No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3730.3894707166052354No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3620.3779849850163411No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT3360.3508368921698635No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG3290.34352779024965807No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT3230.33726284574662474No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT3180.3320420586607637No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGCCTCTTGTAGAAGGGATG3050.3184680122375249No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG2970.31011475290014723No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2900.3028056509799417No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2710.2829666600536697No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGCAGGTGCAAATTGTCAGTGTGT2630.274613400716292No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCGAGGCAGAGGACAGGTATC2600.27148092846477534No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2530.2641718265445699No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTGCTGAGATTGGCCTGTGTCTAT2490.259995196875881No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAACTTAGCAACCTGTACATT2450.25581856720719215No Hit
CATAGACCTGTGTGTGAGGCATTGTTACCGTAGATGCTCAGATCTCAAAA2380.2485094652869867No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2330.2432886782011256No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT2320.2422445207839534No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2280.23806789111526452No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2220.23180294661223128No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG2170.2265821595263702No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGTCCAGTGAACTCAAGGGGG2150.2244938446920258No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA1990.20778732601727037No Hit
CATAGAACATCTACAGAACTCTCTACCCACAGTGAAACAAGATCGTGCCT1930.20152238151423707No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGACGACATGTGTGAGAGGGAAGGAC1920.2004782240970649No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG1850.1931691221768594No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1850.1931691221768594No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1830.19108080734251495No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1680.17541844608493176No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA1670.17437428866775956No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1670.17437428866775956No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGTGAAACAAGATCGTGCC1670.17437428866775956No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC1620.16915350158189849No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCTTGGAGAGAAATGCTGCTCTAT1560.1628885570788652No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGACCACACGCACAACTGGCAT1540.16080024224452077No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGTGGAGGGCTTTGCTGTTTC1520.15871192741017637No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTAGAACAGCTAAAAATCTTG1510.15766776999300416No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG1500.15662361257583193No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT1480.1545352977414875No Hit
CATAGATGTGGTCTCAGTGCCCTATGGTGGAGGGCTTTGCTGTTTCTATG1480.1545352977414875No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACAGCTAAAAATCTTGGAGCTCT1470.1534911403243153No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1470.1534911403243153No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT1450.15140282548997086No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACAGCTAAAAATCTTGGAGC1440.15035866807279866No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA1440.15035866807279866No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG1410.14722619582128202No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG1370.14304956615259318No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1370.14304956615259318No Hit
CATAGACAGCTGGGGTGGGAGGTTAGAGAGCACTCTAGGGTGGGGAAAGA1330.1388729364839043No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1330.1388729364839043No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTACAGTGAAACAAGATCGTG1270.13260799198087103No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC1250.1305196771465266No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGTGTGAGA1240.1294755197293544No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1230.12843136231218216No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1210.12634304747783776No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGAGGGTGGGGAAAGAGAGCACTC1200.12529889006066555No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGAACAGCTAAAAATCTTGGA1170.12216641780914891No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC1170.12216641780914891No Hit
CATAGATGTGCCACATACCTTTCCCATCTCCCTCATTATCCCTGTGCCTC1150.1200781029748045No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAGGACACTTTGGACTCTGCCTCTA1150.1200781029748045No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1150.1200781029748045No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGGAGACAGCCGCTCAC1140.11903394555763226No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGTTCTACACATAGAACA1120.11694563072328784No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATTAACTTAGCAACCTGTACATTT1110.11590147330611564No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1110.11590147330611564No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC1100.1148573158889434No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGAACAGCTAAAAATCTTGGA1080.11276900105459899No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT1070.11172484363742678No Hit
CATAGATGTGGTCTCAGTGCCCTATGACACTCCCTCATTATCCCTGTGCC1040.10859237138591013No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGCCAACAGTGAAACAAGATCGTG1040.10859237138591013No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA1040.10859237138591013No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1020.10650405655156571No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGACAGCCGCTCACCTCTATG1020.10650405655156571No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1010.1054598991343935No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAACTTAGCAACCTGTACATTT1000.10441574171722127No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCATAGAACAGCTAAAAATCTT1000.10441574171722127No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG990.10337158430004907No Hit
CATAGATGTGCCACATACCTTTCCCACAGTGAAACAAGATCGTGCCTCTA980.10232742688287687No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTACAGGTGCAAATTGTCAGT980.10232742688287687No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTAATGGAGGAGTATGG960.10023911204853245No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG960.10023911204853245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)