FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807086

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807086
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95771
Sequences flagged as poor quality0
Sequence length150
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT74577.786281859853192No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT62476.522851385074814No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA46704.876215138194234No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA45064.704973321777992No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT39464.120245168161552No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA38003.9677981852544093No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG33433.4906182456067074No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23242.4266218375082227No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT23012.402606216913262No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA20462.1363460755343477No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA15881.658121978469474No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA15091.5756335425128691No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14371.50045420847647No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT14121.4743502730471645No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT12191.2728278915329274No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTACTTTTCTAATCAAT12151.2686512618642387No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9901.0337158430004907No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9591.0013469630681522No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGAGAAGTGTATTAATTATCT8210.8572532394983867No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7780.8123544705599817No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7450.7778972757932986No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA7280.760146599701371No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC6240.6515542283154608No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5920.61814119096595No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5730.598302200039678No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT5560.5805515239477503No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT5390.5628008478558227No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG5370.5607125330214784No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC5000.5220787085861064No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC4880.50954881958004No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA4640.4844890415679068No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG4600.480312411899218No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT4540.47404746739618464No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTACGGCAACATATCAGAA4470.46673836547597913No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTAACACTGAAGACCTTT4310.4500318468012237No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTAGGGTACTTTTCTAATCA4260.44481105971536267No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG3960.4134863372001963No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGAAGTGTATTAATTATCTA3840.4009564481941298No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT3770.3936473462739243No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGTAGAGGAGAATG3750.3915590314395799No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3720.3884265591880632No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3590.37485251276482445No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA3360.3508368921698635No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT3350.3497927347526913No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT3270.3414394754153136No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT3160.3299537438264193No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTGCATTCTCTCAGGGCTGTT3040.31742385482035274No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC2940.3069822806486306No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2870.29967317872842514No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC2740.28609913230518635No Hit
CATAGACACACTGACAATTTGCACCTGCACGGAAGACACAGCACACTCTT2670.27879003038498085No Hit
CATAGATACCTGTCCTCTGCCTCGAGACCTTTTTCTGTAGTCAAGTGATC2520.26312766912739766No Hit
CATAGACACAGGCCAATCTCAGCAGAACAATGCCTCACACACAGGTCTAT2500.2610393542930532No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2420.2526860949556755No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGTAACAATGCCTCACACA2360.24642115045264223No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT2350.24537699303547No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTGTCTCATAGGGCACTGAGACC2330.2432886782011256No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2330.2432886782011256No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG2300.240156205949609No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2220.23180294661223128No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG2140.22344968727485356No Hit
CATAGACCCCCTTGAGTTCACTGGACTACGATAGCGAGAAGAGTGGAGGC2050.21405227052030362No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA2000.20883148343444255No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCGGAAGACACAGCACACTCT1960.20465485376575374No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGGTAGAGAGTTCTGTAGATGTT1840.19212496475968716No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1830.19108080734251495No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1820.19003664992534275No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG1760.18377170542230947No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1700.1775067609192762No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT1660.17333013125058735No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1640.17124181641624292No Hit
CATAGAGGCACGATCTTGTTTCACTGTATATCTAGGAGTAGAACTGCTGG1620.16915350158189849No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG1580.16497687191320964No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGGAGCTGACTTACTGTTCTAT1560.1628885570788652No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGAAACATTGGAAAGATGGGGATC1550.161844399661693No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCAGGAATCTTTGGGAGG1530.15975608482734857No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG1520.15871192741017637No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGGGCACTGAGACCACATCTATG1510.15766776999300416No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAAGACCTTTTTCTGTAGTCAA1500.15662361257583193No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTGCTCCTTCTCACACAAATCT1460.15244698290714306No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1460.15244698290714306No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGCAACATATCAGAAGCATCT1440.15035866807279866No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC1430.14931451065562645No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT1420.14827035323845422No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTACGGCAACATATCAGAAGCA1410.14722619582128202No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA1410.14722619582128202No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG1400.1461820384041098No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGAGTGCTCTCTAACCTCCCACCC1380.14409372356976538No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1350.14096125131824874No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1340.13991709390107654No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1260.13156383456369883No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1260.13156383456369883No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACTGTCTTCAGCTCTTTGAGG1220.12738720489501No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAAACATTGGAA1220.12738720489501No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT1180.12321057522632112No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACAGAAGTGTAT1170.12216641780914891No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACGGAAGACACAGCACACT1170.12216641780914891No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC1160.1211222603919767No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCAGCATTCTCTCAGGGCTGTTCTC1150.1200781029748045No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1150.1200781029748045No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTTGCTCCTTCTCACACAAATCTA1130.11798978814046006No Hit
CATAGAGGCACAGGGATAATGAGGGAGATGGGAAAGGTATGTGGCACATC1130.11798978814046006No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGAATCTTTGGGAGGCTATTA1130.11798978814046006No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1100.1148573158889434No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGATAGCGAGAAGAGTGGAG1100.1148573158889434No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT1090.1138131584717712No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC1090.1138131584717712No Hit
CATAGAGGCACAGGGATAATGAGGGAGTGTCATAGGGCACTGAGACCACA1050.10963652880308236No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATAGGAGGAGCTGACTTACT1040.10859237138591013No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA1040.10859237138591013No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1020.10650405655156571No Hit
CATAGAGGCACGATCTTGTTTCACTGTTGGCTCATAGGGCACTGAGACCA1010.1054598991343935No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC1010.1054598991343935No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACACGGAAGACACAGCACACT1010.1054598991343935No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGGAGGAGCTGACTTACTGTTCTATG1010.1054598991343935No Hit
CATAGACACACTGACAATTTGCACCTGTACGGTAGCTTACACTGCACATG1000.10441574171722127No Hit
CATAGACCACACACACAACTGAGAGTGTGTTGTATAGCTTACACTGCACA990.10337158430004907No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA970.10128326946570465No Hit
CATAGATCCCATACTCCTCCATTACCCTTACGATAGCGAGAAGAGTGGAG970.10128326946570465No Hit
CATAGAGGCACGATCTTGTTTCACTGTGGGAAAGGTATGTGGCACATCTA960.10023911204853245No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGCTTACACTGCAC960.10023911204853245No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAAACATTGGAAAGAT960.10023911204853245No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)