FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58888
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2666545.28087216410814No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA26614.51874745279174No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC15122.5675859258252958No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT9761.6573835076755874No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA8071.3703980437440566No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC7251.23115065887787No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC7211.2243581035185436No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG5880.9985056378209481No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT5110.8677489471539193No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC4510.7658606167640266No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG4380.7437848118462166No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG4380.7437848118462166No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT3870.6571797310148078No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATCGGCAGTGAG3480.5909523162613776No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA3370.5722727890232305No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT3120.5298193180274419No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA2930.4975546800706426No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC2840.48227143051215865No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGAGGTTGCAGC2760.4686863197935063No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAAGGGGAGGTTGC2720.4618937644341801No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG2600.4415160983562016No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG2550.4330254041570438No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTATAGACAGGCAGTCTCAAAC2170.3684961282434452No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA1940.3294389349273197No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT1860.3158538242086673No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1620.2750984920527102No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC1610.2734003532128787No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1600.27170221437304715No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC1570.2666077978535525No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1490.25302268713490017No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATACTTCAGTTGACTATA1430.24283385409591085No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1410.2394375764162478No Hit
CATAGAATGCAGGAGAATATACACAGGTTGTCCAGCCAGTGACAGACAAG1410.2394375764162478No Hit
CATAGAACAAGGCCAGAATTACCCTGGGCAACAGAACAACAACATCTATG1400.23773943757641625No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1380.23434315989675314No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGAAACAGAATCTATTCTTACT1190.20207852193995382No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1180.2003803831001223No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1170.1986822442602907No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGATCTGAGCAAGGATA1170.1986822442602907No Hit
CATAGAGAAGAGAAGGCGACAATGGCACACTGACGACATGGTGGGTGCCT1160.19698410542045916No Hit
CATAGACCACACCCAAACACCACGTACTTCAGTTGACTATAAGAAACACC1140.19358782774079608No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1140.19358782774079608No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1130.19188968890096456No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1130.19188968890096456No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA1100.18679527238146992No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC1080.18339899470180682No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1080.18339899470180682No Hit
CATAGACTTGATGCCCAGGAAACCTCAGACATGTTTCCTAGTTTCAGTTC1060.18000271702214374No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTGGGTGCCTG1060.18000271702214374No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1060.18000271702214374No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACTACACTGACGACATGGTGG1040.17660643934248063No Hit
CATAGACCCTTAGAGTTTCAGCCTCCTCCTGTCTATAGAATTAGCGGAGA1010.171512022822986No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTGACGACATGGTTCTACACATAG970.16471946746365984No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCAGCAGAATCAGGGTTGGTTCT970.16471946746365984No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC960.1630213286238283No Hit
CATAGATCATGGGACTTCAGCATGGCGGTATTTGCAGATTTGGACCTGCG920.1562287732645021No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG920.1562287732645021No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG910.15453063442467055No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG910.15453063442467055No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG880.14943621790517592No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG880.14943621790517592No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA870.1477380790653444No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA840.14264366254584973No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGACCATGCTCA820.13924738486618668No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACACTGACGACATGGTGGG810.1375492460263551No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG800.13585110718652357No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAGAAGAAGAGAGCCTCTGTCCCTG780.13245482950686047No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT780.13245482950686047No Hit
CATAGATTCTCCCTTGTGCTTTTGGTCTGGGAGAGGCTGTTTGAGATCTA760.1290585518271974No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG760.1290585518271974No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG730.12396413530770276No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTTCAGTTGACTATAAGAAACA730.12396413530770276No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT720.12226599646787122No Hit
CATAGACCTTCCTGTTGGCCACACAGTAACTGACTGGAGGGTGGCCATTG710.12056785762803966No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG700.11886971878820812No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTCACACCACTACACTCCAG690.11717157994837657No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGGGAGAGGCTGTTTGAGATCT680.11547344110854503No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGACGACATGGTGGGTGCCT660.11207716342888194No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG660.11207716342888194No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA660.11207716342888194No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC660.11207716342888194No Hit
CATAGATCTGTGGCTCCCGATAAATGTCGTCAGAGGCCTGAGATTGCTGC650.1103790245890504No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG640.10868088574921884No Hit
CATAGACCTTCCTGTTGGCCACACAGGGGAAAGCTGGAGTCCACTCTGCA630.1069827469093873No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT620.10528460806955578No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC620.10528460806955578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)