FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58888
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2490342.28875152832496No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT25304.296291264773807No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG18373.119481048770547No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG10941.85776389077571No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT8951.5198342616492324No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT7631.2956799347914685No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA7581.2871892405923109No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG7391.2549246026355114No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6991.1869990490422497No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG5510.9356745007471811No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG4360.7403885341665534No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG4090.6945387854911018No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG4010.6809536747724494No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA3270.5552914006249151No Hit
CATAGATTTCTGTACCTCACTGCCGATACGGTAGCAGAAGCTTTGAGATT3080.5230267626681158No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT2940.49925281891047407No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT2870.48736584703165337No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG2780.47208259747316944No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA2470.41944029343839156No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG2440.41434587691889685No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGACCTTAGC2420.4109495992392338No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAATGGCGTGATCTCAGC2190.3718924059231083No Hit
CATAGACACAACGTTTGAGACTGCCTGTCTATAGAAGCTTTGAGATTTGT2060.3498166010052982No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1820.3090612688493411No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT1740.2954761581306888No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT1670.28358918625186796No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT1580.26830593669338404No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC1490.25302268713490017No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT1400.23773943757641625No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1390.23604129873658472No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGAAGCTTTGAGATT1360.23094688221709006No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG1340.22755060453742698No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1240.21056921613911156No Hit
CATAGACGGGAAGAGTAAGACCACCCACACAAGGAAGGAAGCTGGGGCAT1220.20717293845944842No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1200.20377666077978535No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA1200.20377666077978535No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1180.2003803831001223No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGCCATACCAAGAATAAGAA1180.2003803831001223No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1160.19698410542045916No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACACAGAGCCTTCAGGTCA1140.19358782774079608No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1120.190191550061133No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1100.18679527238146992No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1100.18679527238146992No Hit
CATAGAACCAACCCTGATTCTGCTGGGGCCAGAGCACAGAAGTAAGAATA1080.18339899470180682No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1080.18339899470180682No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1060.18000271702214374No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG1050.17830457818231218No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGCCATTGTCGCCTT1020.17321016166281755No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGACACCGAAAAA1010.171512022822986No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTACGTGGTGTTTGGGTGTGG1000.16981388398315447No Hit
CATAGAACCAACCCTGATTCTGCTGGAGACCCCATATCTACCAAAGATCT990.16811574514332292No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC990.16811574514332292No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGTTTCCTGGGCATCAAGTC980.16641760630349137No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTATAGACAGGAGGAGGCTGAAAC950.16132318978399673No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT950.16132318978399673No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTGCCATACCAAG920.1562287732645021No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA880.14943621790517592No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA790.13415296834669202No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT760.1290585518271974No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA760.1290585518271974No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC760.1290585518271974No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA740.12566227414753428No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG730.12396413530770276No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC720.12226599646787122No Hit
CATAGATCAAGGTGTGAGCATGGTCCATGTCGTCAGTGTACGTGGTGTTT710.12056785762803966No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTGTGACACCGAAAAACAC710.12056785762803966No Hit
CATAGATCTCAAACAGCCTCTCCCAGACCAAAAGCACAAGGGAGAATCTA710.12056785762803966No Hit
CATAGACGGGAAGAGTAAGACCACCCAACCCAATGGCCACCCTCCAGTCA710.12056785762803966No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA700.11886971878820812No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACTATGGCTTAATGTTTCT690.11717157994837657No Hit
CATAGACGGGAAGAGTAAGACCACCCCAGCTCCACAGGGACAGAGGCTCT680.11547344110854503No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCACAGGAAAGTTGGAACCTA670.11377530226871349No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA650.1103790245890504No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTGCAGAGTGGACTCCAGCT650.1103790245890504No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA630.1069827469093873No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA630.1069827469093873No Hit
CATAGATAGCAGCAATCTCAGGCCTCTGACGACATTTATCGGGAGCCACA610.10358646922972421No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG600.10188833038989267No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG600.10188833038989267No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGTAGTGGTGTGACTATGGC600.10188833038989267No Hit
CATAGATCTCAAACAGCCTCTCCCAGAGGCAAGGGTACTATTTTGATTCT590.10019019155006115No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)