FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147925
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC111557.540983606557377No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC87095.887442960959946No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA83275.629203988507689No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA73264.952509717762379No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT43742.956903836403583No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA40212.7182693932736184No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA38372.59388203481494No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA36282.4525942200439412No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT31872.154470170694609No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT30332.050363359810715No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA29371.9854656075714043No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG22861.5453777251985803No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA20651.3959776913976678No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20081.3574446510055773No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG19821.3398681764407638No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA16931.1444989014703397No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG16461.1127260436031774No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC14750.9971269224269056No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC14260.9640020280547575No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG13870.9376373162075377No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG13780.9315531519351022No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG13720.9274970424201454No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC13530.9146526956227817No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA13530.9146526956227817No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT13190.8916680750380259No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT12020.8125739394963664No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11990.8105458847388879No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG11840.8004056109514956No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9890.6685820517153963No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA9710.6564137231705256No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA9700.6557377049180327No Hit
CATAGACCATGTAATACCATCGTGAGCAGGATGACTTATGGAATCTGAAG9640.6516815954030758No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA8630.5834037519013013No Hit
CATAGACCATGTAATACCATCGTGAGCAGTCACTCAAATATAGACCTCAA8030.5428426567517323No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTCTGGTGGTGCTGGAACTA7870.5320263647118472No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7230.48876119655230693No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT7170.48470508703735No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA6730.454960283927666No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT6630.44820010140273786No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTCATCGGCCGCACTGAAAT6510.44008788237282404No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6480.4380598276153456No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA6360.42994760858543185No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6290.4252154808179821No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6160.4164272435355755No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT6080.4110190975156329No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC5620.37992225790096334No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACACTGATCTAGCTTCGGAA5430.3670779111035998No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT5330.3603177285786716No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC5270.35626161906371473No Hit
CATAGATGCACCAGAAGCCACCTACCGTACAATGGGCACACTTAACACCT5150.3481494000338009No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5130.3467973635288153No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT5060.34206523576136555No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT4960.3353050532364374No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAATGGGCACACTTAACACC4940.3339530167314518No Hit
CATAGATGCACCAGAAGCCACCTACCGATCTGGTGGTGCTGGAACTAGTT4880.32989690721649484No Hit
CATAGAATTCCCCAATGTCCTGTGCATCGGCCGCACTGAAATTGTCTATG4780.3231367246915667No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4480.30285617711678214No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4420.29880006760182526No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4380.296095994591854No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4320.2920398850768971No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC4230.2859557208044617No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4220.2852797025519689No Hit
CATAGATTGCCTCATTGTGCCAGACATCGGCCGCACTGAAATTGTCTATG4050.27378739225959103No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3920.2649991549771844No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT3850.26026702720973466No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT3670.24809869866486398No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG3600.24336657089741423No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT3510.23728240662497885No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAGCATGAGAAGAATGGC3410.2305222241000507No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT3390.22917018759506508No Hit
CATAGATCTGGGAGGTGAAGAGGACAGTTTGCCAAGATTGTAGGAGTAGA3340.225790096332601No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC3310.22376204157512253No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGAACAAGGGCATGGT3290.2224100050701369No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3200.21632584079770154No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3180.21497380429271593No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3110.21024167652526618No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3090.20888964002028057No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA2950.1994253844853811No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTACACCCGTAATCCCTCCCTTTTC2900.19604529322291703No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2880.1946932567179314No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT2880.1946932567179314No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC2830.1913131654554673No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2800.18928511069798884No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTAGGAAAATGTCAGT2710.18320094642555348No Hit
CATAGACCCCCATGCAACCACATCTATGCCCCTTCATTTTGCTGGAACTC2700.18252492817306065No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCCCTTTACCTACCTTCTC2640.17846881865810377No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2570.17373669089065405No Hit
CATAGACCCACTTACACACACAGGTTTCTTGTGCCCTGTGATTGTCCTGG2470.1669765083657259No Hit
CATAGATCATGAATGACTCCCACTCTGTTTGCCAAGATTGTAGGAGTAGA2460.16630049011323306No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCTGGCAAAAGGGTAAGAG2340.15818827108331926No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTACAGCCTACATCCCTCAT2280.15413216156836235No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2270.15345614331586954No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT2260.1527801250633767No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2210.14940003380091263No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT2200.14872401554841982No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2190.148047997295927No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2180.1473719790434342No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2140.1446679060334629No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGTCACTCAAATATAGACCT2020.1365556870035491No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA2000.13520365049856345No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGGGCAAGTGTATGGTCAGTTCT1960.1324995774885922No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1880.12709143146864965No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGATGACTTATGGAATCT1830.12371134020618556No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGAATTAGAGCCAGTTC1760.11897921243873585No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG1630.11019097515632921No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC1630.11019097515632921No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGACCTTTTAGCTATTAAGATG1620.1095149569038364No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGAAAATGTCAGTGGGCCATCTA1550.10478282913638669No Hit
CATAGAAGGGCAATTATCTCATCCTAGACACTGATCTAGCTTCGGAATGT1550.10478282913638669No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGGAGAGAACAAGGGCATGGTCA1490.10072671962142977No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCCAGCATGAGAAGAATGGCCTC1480.10005070136893696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)