FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152385
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5329134.97128982511402No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG78325.139613479016964No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG64264.216950487252682No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT51213.360566984939463No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC45622.993732978967746No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA35042.299438921153657No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT32432.1281622206910127No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG31972.097975522525183No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG27381.7967647734357057No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG16681.0945959247957475No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG12550.8235718738721002No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA11920.7822292220362896No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT11640.7638547101092628No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC11300.7415428027693014No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA10560.6929815926764445No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT9080.5958591724907307No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC8560.5617350789119664No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA7990.5243298224890901No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT7990.5243298224890901No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTACTTGGCCTCAGTTTCCCCT7370.4836434032221019No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG7000.45936279817567344No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG6600.4331134954227778No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA6560.43048856514748823No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG6400.41998884404633No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC6040.3963644715687239No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTTTTAAAATGAGCA5950.39045837844932246No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA5920.3884896807428552No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC5790.3799586573481642No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT5690.3733963316599403No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT5190.34058470321882073No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC4660.30580437707123403No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC4300.28218000459362796No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA4200.27561767890540406No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA4180.2743052137677593No Hit
CATAGACACCTTGTATATGCCAGGACTAGGGGAGACACTGGGGGCACAAA4060.26643042294189057No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTCTATGAGGCAAAGCT4050.2657741903730682No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACACTGATGTGGCATGGA3840.25199330642779805No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA3680.24149358532663975No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG3520.2309938642254815No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA3380.22180660826196805No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA3180.20868195688552021No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC3150.20671325917905303No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG3050.20015093349082916No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT3010.1975260032155396No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG2910.1909636775273157No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2890.1896512123896709No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG2850.18702628211438135No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG2790.183088886701447No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2770.18177642156380222No Hit
CATAGATGGTGGGTTCTGGAGAGAGCAAAGCTGCTATGGGATCTTCTATG2710.17783902615086788No Hit
CATAGATGATGTGAAAAGGACCCATGGGAAGTAGGGAATGATTACAAGTT2520.16537060734324244No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2510.16471437477442005No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATACCTAGTGATTAC2470.1620894444991305No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA2440.1601207467926633No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2390.15683958394855135No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA2230.14633986284739312No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT2230.14633986284739312No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA2230.14633986284739312No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATCTTCAGAACGCGGCAAATG2180.14305870000328116No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA2150.14109000229681398No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC2140.1404337697279916No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2110.13846507202152442No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGATGTGGCATGGAGAAGGG2090.13715260688387965No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2060.1351839091774125No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT2060.1351839091774125No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTGGCCTCAGTTTCCCCTCCTT2050.1345276766085901No Hit
CATAGATGATGTGAAAAGGACCCATGGTCTATGTGTAGAACCATGTCGTC2030.13321521147094528No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1990.13059028119565574No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1920.12599665321389902No Hit
CATAGACACACCCAACTCTGCTCAGTACGGTAGCAAGACTTGGTCTCATA1860.12205925780096466No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1840.12074679266331988No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATAGACAACACAGGATCCAGGTGT1810.11877809495685271No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1780.11680939725038553No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA1730.11352823440627358No Hit
CATAGACCTGACCTCATGATCTGCCTGACTCAGCCTCCTGAAGTGCTGGG1650.10827837385569444No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCGAAAGTGATCAGAAGCTCTATG1600.1049972110115825No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGATGTTTTAAAATGAGCAC1560.10237228073629295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)