FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences408991
Sequences flagged as poor quality0
Sequence length150
%GC43

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8446520.652043688002912No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG271306.633397800929605No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG209985.134098305341682No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC138813.3939622143274546No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT134543.289558938949757No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG120392.943585555672374No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG118862.906176419530014No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT109972.6888122232518565No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA97242.3775584303811086No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG64641.580474875975266No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG53591.3102977816137764No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA37230.9102889794640958No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA34190.8359597154949621No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT33410.8168883911870921No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT29330.7171306948074653No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC28180.6890127166612467No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT27850.6809440794540711No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC27680.6767875087715867No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC26400.6454909765740566No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTTTTAAAATGAGCA23880.5838759288101694No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC21250.5195713353105569No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG21060.514925756312486No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT20950.5122362105767608No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA20830.5093021606832424No Hit
CATAGACCAAACACAGAAGACATGGCATATACAAGGTGCCATCAATTTAA20160.4929203821110978No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA19320.4723820328564687No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT18840.46064583328239495No Hit
CATAGAGGCTGGGTGACTTGGTGAATGACTTGGCCTCAGTTTCCCCTCCT18840.46064583328239495No Hit
CATAGATGTGAGCACTACTGATAATCCCTTAGATTTATCCAGCATGCCCC18740.45820079170446293No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG18630.45551124596873765No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGCAGAGACTTGGCCTCAGTTTCC18490.45208818775963283No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCTCTCTCATAGCAGCATTTA17040.41663508487961837No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC17000.4156570682484455No Hit
CATAGATGACCTGTTAATCTGCCCCCTTGGCCTCAGTTTCCCCTCCTTCT16830.41150049756596113No Hit
CATAGACTGGCGGTGATTGCTTTCCTATGTGTAGAACCATGTCGTCAGTG16580.40538789362113103No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT16030.3919401649425049No Hit
CATAGATGATGTGAAAAGGACCCATGGATGATGTGGCATGGAGAAGGGTC14910.3645556992696661No Hit
CATAGATGTGAGCACTACTGATAATCCCTCAATGAATGTTGGAGAGGCAC14660.358443095324836No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATACCTCTCTCATAGCAG14450.35330850801117875No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC13500.3300806130208244No Hit
CATAGACTGGCGGTGATTGCTTTCCTACTTGGCCTCAGTTTCCCCTCCTT13210.3229899924448215No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG13040.3188334217623371No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAA12980.3173663968155778No Hit
CATAGATGATGTGAAAAGGACCCATGGTAGATGATGTGGCATGGAGAAGG12860.3144323469220594No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCAGTCTGCATAGCCACATCT12470.3048966847681245No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG11590.28338031888232257No Hit
CATAGATGATGTGAAAAGGACCCATGGGTCAGTGTAGATTTATCCAGCAT11530.2819132939355634No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGTAGCAGACACTGGGGGCACAAA11010.2691990777303168No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG10840.26504250704783233No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT10500.2567293656828634No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT10240.2503722575802401No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATCAATTTAAGGTAGGCACTTCCT9870.24132560374189163No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACTTGGCCTCAGTTTCCCCTCCTT9380.22934490001002467No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGACTTGGCCTCAGTTTCCCCTCCT9000.22005374201388295No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC8290.20269394681056552No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT8230.2012269218638063No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA8150.1992708886014607No Hit
CATAGATCCACTGTGCTATCTCTGACAGGTTCTACACATGAATGTTGGAG8080.19755935949690825No Hit
CATAGACCAGCTTTGCATGAGTGTGGTACGATAGCAAAGCTGCTATGGGA7990.1953588220767694No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG7750.18949072228973254No Hit
CATAGATGTGAGCACTACTGATAATCCCTACTGAGCATCCCTCATTACTC7720.18875720981635294No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA7620.1863121682384209No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTGCACACTACAATTACAGTACTA7230.17677650608448597No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA7020.17164191877082868No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA6970.17041939798186267No Hit
CATAGATTAGGGGTGACGGACTAGCCAGACTTGGCCTCAGTTTCCCCTCC6800.16626282729937822No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA6550.16015022335454815No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC6450.1577051817766161No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG6340.15501563604089086No Hit
CATAGAACTTGCTCTCAAACTTCAGGGTGCACCAGTGTAGCAGACCATCT6310.15428212356751125No Hit
CATAGACACACCCAACTCTGCTCAGTGTACTCAGTCTGCATAGCCACATC6030.14743600714930158No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC5620.13741133667978023No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTGAGGTAAAACT5600.13692232836419385No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAAACACTCAAAACAG5550.13569980757522782No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA5470.13374377431288217No Hit
CATAGATGATGTGAAAAGGACCCATGGGAAGTAGGGAATGATTACAAGTT5330.13032071610377735No Hit
CATAGATGACCTGTTAATCTGCCCCCACTCAGTCTGCATAGCCACATCTA5250.1283646828414317No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG5130.12543063294791326No Hit
CATAGACACACCCAACTCTGCTCAGTCTACTCAGTCTGCATAGCCACATC5110.12494162463232689No Hit
CATAGATTAGGGGTGACGGACTAGCCTAGCAGGACTCAGTCTGCATAGCC4940.12078505394984242No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATGATGTGGCATGGA4900.11980703731866961No Hit
CATAGACTTACTGCCCTCACTCCGTCTCGGTAGCAAACACTCAAAACAGC4890.1195625331608764No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG4840.11834001237191039No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA4830.11809550821411717No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT4820.11785100405632398No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGTCTCATAGAGGGGAGACACTG4720.11540596247839195No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG4700.11491695416280553No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTTGAGGTAAAACTAT4550.11124939179590748No Hit
CATAGATTAGGGGTGACGGACTAGCCACTTGGCCTCAGTTTCCCCTCCTT4470.10929335853356187No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA4320.10562579616666382No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTTGCTCATCCATTGTTGATC4190.10244724211535218No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGAGACACTGGGGGCACAAAGT4110.10049120885300654No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACACTGGGGGCACAAAGTT4090.10000220053742015No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)