FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58842
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2411840.98772985282621No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA22493.822099860643758No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT16202.7531355154481494No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC11912.0240644437646576No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC9281.5771047890962238No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC7931.3476768294755448No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC6311.0723632779307297No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA5690.9669963631419735No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG5500.9347065021583223No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA5140.8735257129261412No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT5120.87012678019102No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG4770.8106454573263995No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA4470.759661466299582No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA3890.6610924169810679No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG3680.6254036232622957No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT3280.5574249685598722No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3180.5404303048842664No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC3120.5302335066789028No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC2910.4945447129601305No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTTCTA2650.45035858740355533No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGACTCTTC2520.4282655246252677No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG2430.4129703273172224No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT2350.3993745963767377No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC2220.37728153359845007No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTAGGCAGTCTCAAACGTTG2200.3738826008633289No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA2160.36708473539308656No Hit
CATAGAACAATGTAATAAGCATCGGAGGATCGCTTGGGCCCAGGAGTTCC2100.35688793718772305No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTATGTGGAGGCCTGAGATTGCT2060.35009007171748074No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT2050.3483906053499201No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGGGTGAGAAATGATGATGGCT1890.32119914346895073No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGAGACAGCCGCTCACCTC1850.3144012779987084No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA1750.29740661432310256No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA1750.29740661432310256No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1630.27701301791237554No Hit
CATAGAGCTATCAGTATACTCCCACCATGAAATACTATGCAGCCATAAAA1610.27361408517725433No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1600.27191461880969375No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT1450.24642262329628495No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1420.2413242241936032No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1390.23622582509092144No Hit
CATAGACTTGATGCCCAGGAAACCTCTACACATAGAGCTGCTTTTCTCTT1390.23622582509092144No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTGGGACATGGATGA1390.23622582509092144No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1390.23622582509092144No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1370.23282689235580029No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1360.23112742598823968No Hit
CATAGACTTGATGCCCAGGAAACCTCGGCAGTGAGGTACAGAAATCTATG1350.2294279596206791No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1340.2277284932531185No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCATGCCTTTAATCACAGCATTTT1310.22263009415043675No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG1300.22093062778287617No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGCAGAATCAGGGTTGGTTCTATG1260.21413276231263384No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTGACGACATGGTTCTACACATAG1200.20393596410727033No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGTTGCAGCGAGCCAAGATCGTGC1190.20223649773970973No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1180.20053703137214912No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGAGGAATTCTTGCCAGGGAT1170.19883756500458857No Hit
CATAGAGAAGAGAAGGCGACAATGGCGTAAACTCGGGAGGCGGAGATTGC1110.18864076679922503No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACAGAGACACCATGGAATACT1100.18694130043166446No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGCACTGACGACATGGTGGGTG1090.18524183406410388No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1060.18014343496142213No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1060.18014343496142213No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA1060.18014343496142213No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1060.18014343496142213No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG910.15465143944801332No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG880.14955304034533157No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG870.147853573977771No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGCAACAGAACAACAACAT860.14615410761021042No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG850.1444546412426498No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG840.14275517487508924No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGGGGACATGGATGAAG830.14105570850752863No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG830.14105570850752863No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC800.13595730940484688No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCATGGCTAGGGTATCAGGAGT790.13425784303728627No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTGGGCAACAGAACAACAAC790.13425784303728627No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC790.13425784303728627No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG780.1325583766697257No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGGAATTCTTGCCAGGGATCT780.1325583766697257No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATACACACCATGGAATACT780.1325583766697257No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT780.1325583766697257No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC770.13085891030216512No Hit
CATAGACCTTCCTGTTGGCCACACAGGAGGCTGAGGTGGGAGGATCACTT740.12576051119948337No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG720.1223615784643622No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA710.1206621120968016No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGACATGGTGGGTGCCTGATTGTT700.11896264572924102No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTTCTAC680.11556371299411984No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGTGGAGGCTGC650.11046531389143809No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTAAGGGGGCAGCAGAACAG640.1087658475238775No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG640.1087658475238775No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT640.1087658475238775No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA630.10706638115631692No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC630.10706638115631692No Hit
CATAGACAGGAGGAGGAAGAAGAGGACACTGACGACATGGTTCTACACAT620.10536691478875632No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG610.10366744842119574No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG590.10026851568607456No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG590.10026851568607456No Hit
CATAGAGGGTGTTTTTCGGTGTCACATGCCTATAGTCCCAGCTACTTGGG590.10026851568607456No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCTTAGAGAGTTGCCGAGGGAACT590.10026851568607456No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)