FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005807106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005807106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58842
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2242938.117331158016384No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG22863.8849801162434994No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT22373.8017062642330313No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG12662.151524421331702No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG11782.00197138098637No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA9911.6841711702525408No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6341.0774616770334116No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG5760.9788926277148976No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT5760.9788926277148976No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG5510.9364059685258828No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG4930.8378369192073689No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT4880.8293395873695659No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT4850.8242411882668842No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT4240.7205737398456885No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA3580.6084089595866897No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG3440.5846164304408417No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT3100.5268345739437816No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA3000.5098399102681758No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTGCCATA2560.43506339009551No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC2550.4333639237279494No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC2500.42486659189014647No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG2250.38237993270113185No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG2210.3755820672308895No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT2200.3738826008633289No Hit
CATAGACACAACGTTTGAGACTGCCTAGAGAAGCTTTGAGATTTGTGTCT2050.3483906053499201No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA2010.34159273987967775No Hit
CATAGATAGCAGCAATCTCAGGCCTCCACATAGAGGCAAGGGTACTATTT1970.3347948744094354No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC1960.3330954080418749No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT1830.3110023452635872No Hit
CATAGAGCCATCATCATTTCTCACCCAGAGGCAAGGGTACTATTTTGATT1740.295707147955542No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC1720.29230821522042083No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGACTGGAGTGCAGCAGTGTGATCA1710.2906087488528602No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1610.27361408517725433No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1550.2634172869718908No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1440.2447231569287244No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACTATGGCTTAATGTTTCT1340.2277284932531185No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC1310.22263009415043675No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGAGGTTTCCTGGG1280.217531695047755No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG1270.21583222868019442No Hit
CATAGATAGCAGCAATCTCAGGCCTCCCAAAATGCTGTGATTAAAGGCAT1210.20563543047483088No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC1200.20393596410727033No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG1190.20223649773970973No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1170.19883756500458857No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAATGCAGTGGTGCAATCTCAGC1170.19883756500458857No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATTCTT1160.19713809863702797No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1130.19203969953434621No Hit
CATAGACGGGAAGAGTAAGACCACCCTCTATGTGTAGAACCATGTCGTCA1090.18524183406410388No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGCAGGAAAGTTGGAAC1080.18354236769654328No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1060.18014343496142213No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1030.17504503585874037No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1030.17504503585874037No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCTGTGGCACGATCTTGGC1010.1716461031236192No Hit
CATAGATCCCTGGCAAGAATTCCTCAGAAGCTTTGAGATTTGTGTCTGTT990.168247170388498No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC960.16314877128581626No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG930.1580503721831345No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA890.15125250671289217No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA880.14955304034533157No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA880.14955304034533157No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG870.147853573977771No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA870.147853573977771No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCAAAGGACATGAACTCATCCTT850.1444546412426498No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA830.14105570850752863No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG820.13935624213996806No Hit
CATAGAACAATCAGGCACCCACCATGGACTCCTGATACCCTAGCCATGGG770.13085891030216512No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGAGAAGCTTTGAGATTTGTGTCTG760.12915944393460452No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA760.12915944393460452No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGAAGCTTTGAGATTTGTGTCTGTT720.1223615784643622No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT720.1223615784643622No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGTAGTGGAGCTATCATGGC720.1223615784643622No Hit
CATAGATCCAGCTTCATCCATGTCCCCAGTGTAACCTGTGTATATTCTCC720.1223615784643622No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT720.1223615784643622No Hit
CATAGAACAATCAGGCACCCACCATGTCAGGTAAACAAACTTCTGGCCCT710.1206621120968016No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACGTGAACTCATCCTT700.11896264572924102No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA680.11556371299411984No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT680.11556371299411984No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC670.11386424662655925No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA660.11216478025899868No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT650.11046531389143809No Hit
CATAGACACAACGTTTGAGACTGCCTCCTCCCTGTTCTGCTGCCCCCTTA610.10366744842119574No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA600.10196798205363516No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC600.10196798205363516No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG590.10026851568607456No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTT590.10026851568607456No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)